Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4992 ATGGGATCCGAAGCTCCCATTCAAATCCTCCTAGTATCTTACCCTGCACAAGGACACATAAACCCTCTTCTTAGACTAGCAAAGTGTCTTGCAGCAAAGGGCTCTTCTGTCATTTTCATCACAACAGAGTTCGCCGGCAAAAACATGCGAACCGTTAACAACATCACCGATAAATCAACCACCTCAATTGGCGACGGTTCTCTCACTTTCCACTTCTTTGACGACGGTTTACCAGAAGATGACCCCATCAGACCAAGTCTCAGCGGCTACTCCGAACAGCTTGAACTTGTTGGAAGAAAGTTTCTTTCTGAATTGATCCAGAATCATGCTGAGTCAAACAAACCAATTTCATGTATCATAAACAACCCTTTTCTTCCTTGGGTTTGTGATGTAGCGACGGAACATGATATTCCTTCTGCTTTGTTGTGGATTCAATCCGCAGCTGTTTTCGTAGCTTACTATAACTACTTCCATAAACTGGTACGTTTTCCTACGGATTCAGAGCCTTATATTGATGTTCAACTCAACTCTTCTTTTGCTCTTAAATACAATGAAATCCCAGATTTTCTACATCCTTATAGTAAATATCCATTTCTAGCGACACTCATCTTAGAACAGTTTAAGAATTTGTCTAAAGTGTTTTGTGTTCTGGTGGATACATATGAAGAACTCGAACATGATTTCATCGAGTACGTTTCAGAAAAATCGATCCTCATGAGACCTATTGGTCCTTTGTTCAACAACCCAAAAATCAAAGATGCCAGTGATATTCGAGGCGACTTTGTTAAGAGAGATGATTGTAATATTGTAGAGTGGCTGAACACGAAGCCAAAAGGCTCAGTGGTTTACATTTCTTTTGGGACTATTGTGTATCTTCCACAAGAACAAGTGGATGAAATTGCATATGGGTTGTTGGATTCTCGAGTATCTTTTCTATGGGTATTGAAACCACCTCCTAAGGAAGTTGGTCGGAAGCCACATGTTTTGCCCGTTGGGTTTTTGGAGGAGACAAGTGGGAGAGGAAAAGTCGTGAAGTGGGGTCCACAAGAAGAAGTATTGTCCAATTCTTCGGTGGGATGTTTCTTAACACATTGTGGTTGGAATTCATCCATGGAAACACTTACTTTAGGAGTTCCGGTGTTGACTTTTCCAGCATGGGGTGATCAAGTTACAAATGCGAAATTTCTGGTTGATGTTTTTGGAGTTGGGAGTAGGTTGGGTTATAGTCAAATTGAAGATAAATTGGTAACAAGAGATGAAGTGAAGAAGTGCTTATTGGAAGCAATGGCTGGGGAAAAGGCAGAGGAGTTTAAGAAAAATGCGATCAAGTGGAAGAAGGCGGCGGAGGTGGCGGTGGCGACTGGTGGATCATCTGATCGGAATCTTGATGAATTTATGGAAGATATTAAGAAACATGGATCTGTATAA 1428 0.4118 MGSEAPIQILLVSYPAQGHINPLLRLAKCLAAKGSSVIFITTEFAGKNMRTVNNITDKSTTSIGDGSLTFHFFDDGLPEDDPIRPSLSGYSEQLELVGRKFLSELIQNHAESNKPISCIINNPFLPWVCDVATEHDIPSALLWIQSAAVFVAYYNYFHKLVRFPTDSEPYIDVQLNSSFALKYNEIPDFLHPYSKYPFLATLILEQFKNLSKVFCVLVDTYEELEHDFIEYVSEKSILMRPIGPLFNNPKIKDASDIRGDFVKRDDCNIVEWLNTKPKGSVVYISFGTIVYLPQEQVDEIAYGLLDSRVSFLWVLKPPPKEVGRKPHVLPVGFLEETSGRGKVVKWGPQEEVLSNSSVGCFLTHCGWNSSMETLTLGVPVLTFPAWGDQVTNAKFLVDVFGVGSRLGYSQIEDKLVTRDEVKKCLLEAMAGEKAEEFKKNAIKWKKAAEVAVATGGSSDRNLDEFMEDIKKHGSV* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4992 475 CDD GT1_Gtf-like 9 469 IPR002213 GO:0008194
Psa6g4992 475 Gene3D Glycogen Phosphorylase B; 256 450 - -
Psa6g4992 475 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 5 472 - -
Psa6g4992 475 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 5 472 - -
Psa6g4992 475 Gene3D Glycogen Phosphorylase B; 12 462 - -
Psa6g4992 475 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 473 - -
Psa6g4992 475 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 249 402 IPR002213 GO:0008194
Psa6g4992 475 ProSitePatterns UDP-glycosyltransferases signature. 346 389 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4992 Psa-Chr6 433138015 433140089 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4992 3 469 Glycosyltransferase AT4G15480 52.350 8.74e-177 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4992 - K23279 gmx:100804361 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4992 6 433138015 433140089 Psa6g4992 6 433138015 433140089 ECH