Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4974 ATGGACGCTATGGTACGGTTGACGACGACACTTGCCATAACCATCTCCCTTCTCTCAACCTTCGCAAACATCGCTCTCACCTTCGACGGCGGCGGCGACACCAAACAACAACCAACTCTCTGCGGAGAACTCGTTCTCCCCGCCGGTTACCCTTGCTCCGAACATGTGATTCAAACAAAGGATGGTTTCTTGTTAGGTCTTCAGCGTGTGTCTTCTTCTGCGAGTATTGGTTATCATGCTCGAGAATCAAGACCTCCGGTTCTGCTTCTACATGGCCTATTCATGGCAGGTGATGCATGGTTTTTAAATACACCAGAACAATCATTGGGCTTCATCCTTGCGGATCATGGTTTTGATGTTTGGGTCGGAAATGTGCGTGGAACACGTTGGAGCCATGGCCATATATCTTTATCAGAGAAGAATAGGCATTTTTGGGATTGGAGCTGGCAGGAATTAGCCCTGTATGATCTTGCAGAAATGATCAATTTTATTAATTCAGTGACAAACTCAAAGCTATTTGTTGTTGGGCATTCACAGGGGACGATTATATCTTTGGCTGCTTTTACTCAACCTGAGATAGTAGAAAAGGTGGAAGCAGCAGCTCTTCTATCTCCAATATCATACTTGAATCATGTTAGTGCACCTATGGTACAAAGAATGGTAAAGATGCACATTGATCAGATGATTGTTACAATGGGTGTTCATGAACTGAACTTCAAAAGTGACTGGGGAGCCAATCTCTTGGTTTCCTTATGCGATACGCGTCTAAGTTGCAGTGACATGCTGTCATCCATTACAGGAAAGAATTGTTGCTTCAATGAGTCACGCGTGGCTTATTATCTTGAACAAGAACCTCACCCATCATCCTCCAAAAACTTGAACCACCTTTTCCAGATGATCCGCAAAGGTACTTTCTCCAAGTATGATTATGGAAAGCTTAGAAATCTAAAAGAGTATGGCAACATCAAACCACCTAAATTCGATCTCAGCCGCATACCCAAGTCACTGCCTTTGTGGATGGCTTATGGGGGAAATGATGCTTTAGCAGATATAACTGATTTCCAGCACACACTTGAAGAACTGCCATCCACACCAGAGGTGGTTTATCTTGAAAAGTATGGTCATGTTGACTTCATTTTAAGCTTGCAAGCAAAACAAGATCTTTATGACCCTATCATCAATTTTTTCAATTCAATGGGGAAAGTTAGTAGTATTTAA 1218 0.4278 MDAMVRLTTTLAITISLLSTFANIALTFDGGGDTKQQPTLCGELVLPAGYPCSEHVIQTKDGFLLGLQRVSSSASIGYHARESRPPVLLLHGLFMAGDAWFLNTPEQSLGFILADHGFDVWVGNVRGTRWSHGHISLSEKNRHFWDWSWQELALYDLAEMINFINSVTNSKLFVVGHSQGTIISLAAFTQPEIVEKVEAAALLSPISYLNHVSAPMVQRMVKMHIDQMIVTMGVHELNFKSDWGANLLVSLCDTRLSCSDMLSSITGKNCCFNESRVAYYLEQEPHPSSSKNLNHLFQMIRKGTFSKYDYGKLRNLKEYGNIKPPKFDLSRIPKSLPLWMAYGGNDALADITDFQHTLEELPSTPEVVYLEKYGHVDFILSLQAKQDLYDPIINFFNSMGKVSSI* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4974 405 PIRSF Steryl_ester_lip 2 401 IPR025483 GO:0016788
Psa6g4974 405 Gene3D alpha/beta hydrolase 32 398 IPR029058 -
Psa6g4974 405 PANTHER TRIACYLGLYCEROL LIPASE 1 30 399 - -
Psa6g4974 405 SUPERFAMILY alpha/beta-Hydrolases 45 397 IPR029058 -
Psa6g4974 405 PANTHER LYSOSOMAL ACID LIPASE-RELATED 30 399 - -
Psa6g4974 405 Pfam Partial alpha/beta-hydrolase lipase region 47 104 IPR006693 GO:0006629
Psa6g4974 405 Pfam Serine aminopeptidase, S33 109 238 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4974 Psa-Chr6 432375826 432380739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4974 39 404 Acyl Lipid Metabolism Gene Families AT2G15230 63.934 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4974 K01052 - gmx:100803830 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4974 6 432375826 432380739 Psa6g4974 6 432375826 432380739 ECH