Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4969 ATGGCTAATTTCTCCGAGTTTCAACCGTTGAACGAGACCACACTCATCGAATACATAAAATCCATCCCTTCACTTTCATCCAAACTCGCCAACAATTTCTCCGACATAACCGTTAAAGAAGTCGGCGATGGCAACCTCAATTTCGTCTTCATTGTTTCCAACTCCTCCGGTTCTCTCGTCATCAAACAGGCTCTGCCGTATGTTCGTTGCATAGGAGAATCATGGCCGATGACGAAAGAGAGAGCTTATTTTGAGTCGTTGGCGTTGAAAGAGGAGGGTAAACTGTGTCCGGAACATGTGCCGGAAGTTTATCATTTTGATCGTGTTATGTCTTTGATTGGTATGCGTTATTTGGAGCCACCGCATATAATTCTCAGAAAAGGGTTGATTGCTGGTGTTGAGTACCCTTTGTTATCTCAACACATTTCTGATTTCATGGCAAATACACTCTTCTTTACTTCTCTGCTTTTCCGTTCTACTACTGAGCATAAACGGGACGTTGCTGAATTTTGCGGGAATGTGGAGTTATGCAGGCTCACCGAGCAGGTTGTTTTTTCTGACCCATATAAAGTTTCTGAATATAATCGCTGGACTTCCCCTGATCTTGATCGTGATGCTGAGGCTGTTCGGGAAGACAATCTACTGAAGCTTGAAGTTGCTGAGCTGAAAGCAAAGTTCTGTGAGAGGGCTCAGGCACTAATACATGGAGATCTACACACTGGTTCAGTGATGGTTACTCCTGAATCAACTCAAGTTATTGATCCGGAATTTGGGTTTTATGGACCAATGGGTTTTGACATTGGAGCATACCTGGGAAACTTAATTCTGGCTTACTTTTCTCAAGACGGACATGCTGATCAAGCAAACGATCGAAAAGGATATAAGGAATGGATTCTTAAGTCAATTGAAGACACTTGGAATCTTTTCCACGATAAATTCACTGGACTTTGGGAAAAGCATAGAAATGGTGCTGGCGAGGCTTATCTTCCAGCAATCTATAACAATCCTGAGGTTCAGCTGCTTGTACAGAAGAAATACATGACAGATTTGTTTCATGACAGTCTTGGATTTGGTGCTGCCAAAATGATAAGGAGAATTGTTGGCGTGGCACACATTGAGGATCTTGAATCTATTGCTGATGCTGGTAAACGAGCAACCTGTGAACGGCGGGCACTTAATTTAGCTAAGATGATTCTCAAAGAAAGAAGAAAATTCGAGAGCATTTCTGAAATTGTCTCCGCAATTCAGCAATTTTAG 1257 0.4232 MANFSEFQPLNETTLIEYIKSIPSLSSKLANNFSDITVKEVGDGNLNFVFIVSNSSGSLVIKQALPYVRCIGESWPMTKERAYFESLALKEEGKLCPEHVPEVYHFDRVMSLIGMRYLEPPHIILRKGLIAGVEYPLLSQHISDFMANTLFFTSLLFRSTTEHKRDVAEFCGNVELCRLTEQVVFSDPYKVSEYNRWTSPDLDRDAEAVREDNLLKLEVAELKAKFCERAQALIHGDLHTGSVMVTPESTQVIDPEFGFYGPMGFDIGAYLGNLILAYFSQDGHADQANDRKGYKEWILKSIEDTWNLFHDKFTGLWEKHRNGAGEAYLPAIYNNPEVQLLVQKKYMTDLFHDSLGFGAAKMIRRIVGVAHIEDLESIADAGKRATCERRALNLAKMILKERRKFESISEIVSAIQQF* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4969 418 TIGRFAM MTRK: S-methyl-5-thioribose kinase 39 414 IPR009212 GO:0009086|GO:0046522
Psa6g4969 418 Pfam Phosphotransferase enzyme family 37 276 IPR002575 -
Psa6g4969 418 PANTHER METHYLTHIORIBOSE KINASE 1 417 - -
Psa6g4969 418 Gene3D Phosphorylase Kinase; domain 1 2 121 - -
Psa6g4969 418 SUPERFAMILY Protein kinase-like (PK-like) 6 417 IPR011009 -
Psa6g4969 418 PIRSF MTRK 2 418 IPR009212 GO:0009086|GO:0046522
Psa6g4969 418 Gene3D - 122 418 - -
Psa6g4969 418 PANTHER METHYLTHIORIBOSE KINASE 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4969 Psa-Chr6 432104622 432110064 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4969 K00899 - gmx:100818359 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4969 6 432104622 432110064 Psa6g4969 6 432104622 432110064 ECH