Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4961 ATGGAAGATGGGGATTGGGTTCTGGTGCGCGCTCCCTCACAGAAACACCTGTGGAAACCATCTTTACCAAATGCTGATGATCTTGATGGTGATGAACCTTCAAGACCATTGAAGGTTACTTTTTCTAGCCCTGCAAAGTACTGGACCGATGCAATCCCAATCGGTAATGGCCGTCTTGGTGCCATGGTTTGGGGCGGTGTTCACACTGATGTTCTACAGCTCAATGAGGACACACTATGGACTGGGGTACCTGGCAACTACACCGACAAAAATGCTCCTGAGGTGCTGGCTGAAGTCCGGAAACTTGTTGATGACAAAAAATATCCCGAAGCTACAACAGCAGCTGAGAAATTGTCAGGAATTCCTTCTGAAGTATACCAACTTCTTGGCGATATTAATTTAGAGTTCGATGATGCTCATCTTAAATATTCGGAAGAGTCTTATCACAGAGAACTTGATTTGGATACTGCGACAGCAAAAATAAAATACAATGTGGGTGATGTAGAATTCACCAGAGAGCATTTTTCTTCTAATCCGGACCAAGTGCTAGTGACAAAGTTTTCCACTAGCAAGTCAGGGTCATTATCATTTACAGTATCTTTGGATAGCAAATTACATCACAATTCACGTTTAAGCGGCCAAAATCAGATAATATTGGAAGGAAGTTGTCCTGTCAAAAGGATCGCGCCACACCTCAATTCCAATGGTGAACCAAAGGGAATTCAGTTTTGTGCAGTTCTTGATCTGCAGATTAGTAATGGCAAAGGAGTTATACATGCTTTGGATGATAAGAAGCTTAGAGTTGAAGGTGCAGACTGGGCTATTTTGCTTCTGACAGCTTCCTCGTCTTTTGATGGTCCATTTACTTATCCTGAAGACTCTAAGAAGGATCCTACTTCCGAGTCCTTGAGTAAAATGAAGTCTGTGAAAAGCTTTTCATATGATAATATATATGCACGCCACTTGGATGATTATCAGCATCTATTTCATCGGGTCTCATTGCAACTCTCTAAAAGTTCCAAGACTAATATCTCTCAATTGGGAGGTGATGATACCGTTCCAACTTCATCAAGAGTCAAATCATTTCAAAAGGATGAAGATCCTTCCTTTGTGGAGCTTTTGTTTCAATATGGCCGATATCTACTAATCGCTTGTTCACGTCCTGGAACTCAGGTGGCAAACCTACAGGGTATATGGAACCAAAATGTTTCTCCTGCATGGGATGGGGCTCAGCACTTGAACATAAATCTTCAAATGAATTATTGGCCATCCCTTTCTTGCAACCTACATGAATGTCAAGAGCCATTATTTGATTACATTTCCTCTATGTCGGTCAATGGTAGTAAAACTGCAAAGGTGAACTATGAAGCAAATGGTTGGGTTGCACATCAGGTTTCTGACTTATGGGTTAAAACATCCCCAGATCGAGGTCAGGCTGTTTGGGCTTTATGGCCAATGGGTGGAGCTTGGCTTTCTACCCATCTATGGGAGCATTACACTCATACAATGGACAAAGAATTTCTAAAAAATAAAGCATATCCTTTGTTGGAAGGATGTACATCATTTTTGTTGGATTGGTTAATTGAAGGCCCTGGTGGACGATTGGAAACTAACCCATCAACTTCACCAGAGCACATGTTCATTGCACCAGATCAAAAGCAAGCTAGTGTGAGCTACTCATCAACCATGGATATTTCAATCATAAAAGAAATTTTCTCTATAATCATTTCTGCTGCTGAGGTTTTGGGAAGACATGATGATGCTATTATCAAAAGAGTAATCGCGTCTCAGTCTAAGCTTCCTCCTACAAAAATTGCTAGGGATGGGTCCATTATGGAATGGGCTGAAGATTTCCAGGACCCAGAGCCATATCATCGACATGTTTCACATTTGTTTGGCTTGTTTCCTGGACACACAATAGATCTTGAAAAAACTCCAGATCTCTGTAAAGCTGTTGATAATAGTCTAATTAAAAGAGGAGACGACGGTCCCGGATGGTCAACAACTTGGAAAGCTGCATTGTGGGCTCATCTTCACAACAGTGAGCATGCATATCGCATGATAAAACACTTGATTATCTTGGTGGACCCTGAGCATGAGGCAGATTACGAAGGAGGACTTTACAGTAACCTGTTCACAACACACCCTCCATTCCAAATTGATGCAAACTTTGGTTTTTCATCAGCAATTGCAGAAATGCTTGTTCAAAGCACAACAAAGGATCTCTACTTACTTCCCGCGTTGCCTCGGGATAAATGGGCAAATGGTTGTGTGAAAGGATTAAAAGCTCGTGGTGGGGTGACTGTTAACATCTGTTGGAAAGAAGGAAATCTGCATGAATTTGGGCTTTGGTCACAAAACCAAAACTCCAAATTGAGATTGCATTATAGAGGGAGCATGGTTATGGCAAATTTATCACCAGGCAGAGTTTACTCATATGATAATGGCTTGAAGTGTGTGAAGACATACTCCCTTAACGAAGTTAATCCTTGA 2493 0.4148 MEDGDWVLVRAPSQKHLWKPSLPNADDLDGDEPSRPLKVTFSSPAKYWTDAIPIGNGRLGAMVWGGVHTDVLQLNEDTLWTGVPGNYTDKNAPEVLAEVRKLVDDKKYPEATTAAEKLSGIPSEVYQLLGDINLEFDDAHLKYSEESYHRELDLDTATAKIKYNVGDVEFTREHFSSNPDQVLVTKFSTSKSGSLSFTVSLDSKLHHNSRLSGQNQIILEGSCPVKRIAPHLNSNGEPKGIQFCAVLDLQISNGKGVIHALDDKKLRVEGADWAILLLTASSSFDGPFTYPEDSKKDPTSESLSKMKSVKSFSYDNIYARHLDDYQHLFHRVSLQLSKSSKTNISQLGGDDTVPTSSRVKSFQKDEDPSFVELLFQYGRYLLIACSRPGTQVANLQGIWNQNVSPAWDGAQHLNINLQMNYWPSLSCNLHECQEPLFDYISSMSVNGSKTAKVNYEANGWVAHQVSDLWVKTSPDRGQAVWALWPMGGAWLSTHLWEHYTHTMDKEFLKNKAYPLLEGCTSFLLDWLIEGPGGRLETNPSTSPEHMFIAPDQKQASVSYSSTMDISIIKEIFSIIISAAEVLGRHDDAIIKRVIASQSKLPPTKIARDGSIMEWAEDFQDPEPYHRHVSHLFGLFPGHTIDLEKTPDLCKAVDNSLIKRGDDGPGWSTTWKAALWAHLHNSEHAYRMIKHLIILVDPEHEADYEGGLYSNLFTTHPPFQIDANFGFSSAIAEMLVQSTTKDLYLLPALPRDKWANGCVKGLKARGGVTVNICWKEGNLHEFGLWSQNQNSKLRLHYRGSMVMANLSPGRVYSYDNGLKCVKTYSLNEVNP* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4961 830 Gene3D - 276 734 IPR012341 GO:0005975
Psa6g4961 830 Pfam Glycosyl hydrolase family 65, N-terminal domain 40 286 IPR027414 -
Psa6g4961 830 SUPERFAMILY Six-hairpin glycosidases 296 780 IPR008928 GO:0005975
Psa6g4961 830 PIRSF UCP007663 18 827 IPR016518 GO:0004560
Psa6g4961 830 PANTHER - 1 828 - -
Psa6g4961 830 PANTHER ALPHA-L-FUCOSIDASE 2 1 828 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4961 K15923 - gmx:100817294 1399.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4961 6 431722123 431727756 Psa6g4961 6 431722123 431727756 ECH