Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4930 ATGCTAGAAAAAATGGCACCTTCAATTTCCCTCTCTGTCCTATTTCTCCTTTTTCTCCAGTTTCCCCTCCAAGCCATCTCAATCAACTCCGAAGGGAATGCTCTTCATGCTTTGAGGACCAGGCTTTCTGATCCCAACAATGTTCTGCAGAGCTGGGACCCAACACTGGTTAATCCGTGTACTTGGTTTCATGTTACATGTGACTCCAACAACCATGTTACTCGCTTAGACTTGGGAAATTCTAATGTTTCTGGAACTCTAGGCTCAGAACTTAGTCATCTACACCATCTGCAGTATCTGGAGTTGTATGGGAATGAGTTAAGAGGAAAGATTCCTAAGGAACTTGGAAAATTGAAAGCACTTATTAGCATGGATTTGTATGATAACAAGTTGGAAGGAAAAATTCCAAAGTCATTTGGCAAGTTGAAGTCATTACAATTCTTGCGTCTAAACAACAACAAGCTGACAGGATCTATCCCAAGAGAACTCACTCGTCTCAAGAATCTCAAAATTTTTGATGTTTCAAATAATGATCTTTGTGGAACAATACCAGTAGAGGGAAACTTTGGATCCTTTCCAATAAAAAGTTTTGAAAATAACAGACTTGGTGGTCCTGAACTGAAAGGACTTGTTCCGTACGATTTTGGATGCTGA 654 0.3991 MLEKMAPSISLSVLFLLFLQFPLQAISINSEGNALHALRTRLSDPNNVLQSWDPTLVNPCTWFHVTCDSNNHVTRLDLGNSNVSGTLGSELSHLHHLQYLELYGNELRGKIPKELGKLKALISMDLYDNKLEGKIPKSFGKLKSLQFLRLNNNKLTGSIPRELTRLKNLKIFDVSNNDLCGTIPVEGNFGSFPIKSFENNRLGGPELKGLVPYDFGC* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4930 217 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Psa6g4930 217 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 13 214 - -
Psa6g4930 217 Pfam Leucine rich repeat 123 179 IPR001611 GO:0005515
Psa6g4930 217 SUPERFAMILY L domain-like 29 205 - -
Psa6g4930 217 Gene3D Ribonuclease Inhibitor 27 208 IPR032675 -
Psa6g4930 217 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4930 Psa-Chr6 430049701 430051583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4930 15 205 Receptor kinase-like Gene Family AT1G71830 57.292 3.21e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4930 - - gmx:100816279 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4930 6 430049701 430051583 Psa6g4930 6 430049701 430051583 ECH