Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4913 ATGAAGCTTCAGAGCTTTTCTCTGGCTTTATTTTTAGGGTTTCTGCTACTATCGTTGACGCCGTCGTCGATGGCCAAATTCTTGGTGGAGAAGAATAGCTTGAGGGTGACGTCGCCGGATTCTATCAAGGGAACATACGATAGCGCGATTGGCAACTTTGGGATTCCTCAATACGGTGGTAGTATGGCTGGGAACGTTGTGTTCCCGAAGGATAATCAGAAAGGTTGTAAAGAGTTTGACGAGTCGGGGATTTCATTCAAATCGAAAGCTGGTGCTCTTCCCACCTTCGTTTTGCTCGATCGGGGAAGTTGCTTTTTTGCTTTGAAGGTGTGGAATGCCCAGAAGGCTGGAGCTTCTGCTGTTCTTGTTGCAGATGATATTGAGGAAAAACTAATCACCATGGACACCCCCGAAGAGGATGGGTCATCTGCAAAATATATAGAGAATATAACAATACCTTCGGCTCTCATAGAGAAAAGTTTTGGTAAAAAATTGAAGAGTGCCATAAGTAGTGGGGATATGGTGAATGTAAATCTTGATTGGAGGGAGGCTGTCCCCCACCCTGATGATCGTGTGGAGTATGAGCTGTGGACCAACAGCAATGACGAGTGTGGAGTTAAATGTGATATGTTGATGGAATTTGTGAAGGATTTTAAGGGTGCGGCACAAATATTGGAGAAAGGTGGCTTTACTCAGTTTACACCCCATTATATAACTTGGTACTGTCCTCAGGCATTCACGTTAAGTAAACAATGCAAGTCTCAGTGCATTAACCATGGAAGATATTGTGCCCCAGATCCTGAGCAAGATTTTAGCACTGGTTATGATGGGAAAGATGTAGTTGTTGAAAATTTGAGGCAGTTATGTGTTTACAAGGTGGCAAATGAAACCCAAAAGCCTTGGGTGTGGTGGGACTATGTCACTGATTTTCAAATTAGGTGCCCAATGAAGGAGAAAAAATACAATAAGAAATGTGCAGATGCTGTCATTGAATCACTTGGTCTTGATATTAAAAAGATTGAAAAGTGCATGGGAGATCCAGATGCCGATTCTGAAAATACTGTTTTGAAAGAAGAGCAAGATGCCCAAATTGGGAAGGGATCGCGAGGTGATGTTACCATATTGCCTACTCTAGTTGTCAACAGTCGTCAGTATCGAGGAAAATTGGAGAAAGGTGCTGTTATGAAAGCTATTTGTTCAGGTTTTGAAGAAACTACTGAACCAGCTGTTTGTTTGAGCAGTGAGGTGGAGACAAACGAGTGCTTGGATAACAATGGTGGTTGTTGGCGGGACAAAGGAGCTAACATAACTGCATGCAAGGATACTTTCCGCGGGCGAGTATGTGAATGCCCCTTGGTAGATGGTGTGCAGTTCAAAGGAGATGGTTATACGACTTGCGAAGCTAGTGGACCTGGACGATGCAAGATAAACAATGGAGGTTGTTGGCATGATGCCCGGAACGGACATGCATTTTCTGCTTGTTCGGATAATGGAGGGATTAAATGCGAGTGTCCTGCAGGGTTTAAAGGTGATGGTGTTAAAGATTGCATAGACATTGATGAATGTAAAGAGAAGAAAGCTTGTCAGTGCCCTGAATGTAGCTGCAAGAATACCTGGGGCAGCTATAACTGCACTTGCAGTGGGGATCTTCTGTATATCAGGGACCATGATACCTGCATAAGTAAAACTTCTAGCCAGGAAGGAAAGTCTGCTTGGGCTGCATTTTGGGTCATCGTAACTGGCTTAGTTCTGGCCGCTGCAGGGGCATACCTTGTCTACAAATATAGAATAAGGTCATATATGGATTCTGAAATAAGGGCCATCATGGCACAATATATGCCATTGGACAGCCAATCAGAAGTTGTAAATCATGTCAACGATGAAAGAGCATGA 1893 0.4358 MKLQSFSLALFLGFLLLSLTPSSMAKFLVEKNSLRVTSPDSIKGTYDSAIGNFGIPQYGGSMAGNVVFPKDNQKGCKEFDESGISFKSKAGALPTFVLLDRGSCFFALKVWNAQKAGASAVLVADDIEEKLITMDTPEEDGSSAKYIENITIPSALIEKSFGKKLKSAISSGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGFTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVVENLRQLCVYKVANETQKPWVWWDYVTDFQIRCPMKEKKYNKKCADAVIESLGLDIKKIEKCMGDPDADSENTVLKEEQDAQIGKGSRGDVTILPTLVVNSRQYRGKLEKGAVMKAICSGFEETTEPAVCLSSEVETNECLDNNGGCWRDKGANITACKDTFRGRVCECPLVDGVQFKGDGYTTCEASGPGRCKINNGGCWHDARNGHAFSACSDNGGIKCECPAGFKGDGVKDCIDIDECKEKKACQCPECSCKNTWGSYNCTCSGDLLYIRDHDTCISKTSSQEGKSAWAAFWVIVTGLVLAAAGAYLVYKYRIRSYMDSEIRAIMAQYMPLDSQSEVVNHVNDERA* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4913 630 Gene3D Laminin 472 522 - -
Psa6g4913 630 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 14 609 - -
Psa6g4913 630 Pfam Complement Clr-like EGF-like 501 521 IPR026823 -
Psa6g4913 630 Gene3D - 24 188 - -
Psa6g4913 630 SUPERFAMILY PA domain 96 171 IPR046450 -
Psa6g4913 630 SMART egfca_6 518 560 IPR001881 GO:0005509
Psa6g4913 630 Gene3D Laminin 523 560 - -
Psa6g4913 630 Gene3D Laminin 411 467 - -
Psa6g4913 630 CDD PA_VSR 52 179 - -
Psa6g4913 630 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 14 609 - -
Psa6g4913 630 CDD EGF_CA 518 546 - -
Psa6g4913 630 Pfam PA domain 64 165 IPR003137 -
Psa6g4913 630 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4913 Psa-Chr6 428428769 428435120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4913 25 630 Miscellaneous Gene Families AT2G14740 84.653 0.0 1092
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4913 - - gmx:100803958 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4913 6 428428769 428435120 Psa6g4913 6 428428769 428435120 ECH