Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4910 ATGAAAGTTGCTACAAAATTATGCAATTTGTTGTTCACCACCATCTCTTTCCTTTTACTCTTCTCAGGCCTTGGCGTTGATTCTATGGATTATGATTATTTTGCTACTACAAAGTGTATAACAGAACCTCATAAAGCACAATATGGAGGGGGTATTATAGTAAATCCAGACTTTGATCACAATATAGAGAATTGGACAGTGTTTGGAAATAATGGAAATAGATTCATTATTGCTAGCAACAGAACACAAACATTGGATAGTTTTTCACAAAAGGTTCTACTCAAGAAAGAGTTACTATACATGTTTTCAGCTTGGATTCAACTGAGTGAAGGAAGTGACATTGTATCTGTTGTTTTTAATATAAATGGAAGTGAATTGGTAAGAGGTGGCCATGTGATAGCAAAAAATGGATGCTGGTCTTTTTTAAAAGGCGGCATAGTCGCAAACTTCTCAAGCTCCGCCGAGATTCTTTTCGAGAGTAATAATCCAAGTGTGGAAATATGGGCTGATAGTGTCTCATTGCAACCATTTACTAAAGAAGAATGGAGATCACACCAAGACAACAATATTGAGAAGGTACGTAAGAGCAGGGTGAGATTTCATGTAAGTAATGCAAATGAGACAGCGTTGGAAGGAGCAAAAGTTGTGATAAAACAAACAAAAGCAAATTTTCCATTTGGATGTGGAATGAACCAGCACATCCTCACAAACGGCGACTACCGGGATTGGTTTGTGTCAAGATTCAAATACACAACTTTCACCAATCAAATGAAATGGTATAGTACAGAGATAATTCAAGGCCAAGAAAACTATACTATCTCAGATGCAATGTTGAAATTCACCAAAGAAAACGGGATTTGTGTGAGAGGTCATAACATTTTTTGGGACGACGAGAAATATCAACCTGAATGGGTGAAGTCCTTATCGCCAGACGAATTACGCGAAGCCGCGGCAAAAAGAATAAAATCTGTTGTTACAAGATATAAAGGAGAATTGATTGCATGGGATGTGGTGAATGAGAATGTTCATTTTCACTTTTACGAGGATAAACTAGGTGAAAATGCATCTGAATTGTACTATTTAAGAGCTTACGAGCTTGATCCAACAACAACATTGTTTATGAATGAGTATAATACTATTGAATATAGCGGTGACAAGGTTGCTAGTCCTGCAAATTATTTCAACAAACTTAACGAAATTCTGCAATCTCCGGAAGCTTCTGAAATGTCATTTGCAATTGGATTGCAATGCCATTTTGGCAGTGGCAGACCAAATCTTGCTTACATGAGATCAGGTCTAGATTTTCTTGGTCAAATTGGATTTCCAATATGGCTCACAGAAACCAGTGTAGATCCTCAACCAAAGCAGGCAGAATACTTTGAAGAGATACTAAGAGAAGGCTACTCGCATCCAGCAGTTAAAGGGATAATAATGTTTGCTGGTCCAGCACAAGCTGGTTTCAACACTACACTTCTTGCTGATGAAAATTTTAAAACAACTCCAACTGGAAAAGTTGTGGACAAGTTGATTAGTGAGTGGGGAATTGGACCTTATACAGCAATTGCAGATCATAGAGGAATCGTAGATATTGCGTTACATTATGGAGAGTATGATGTAACTGTTACTCATCCTTTAACACAACACTCTGAAAAATTAAACATAAGTGTTGGGAAAGAATTTTCACATAAAAACGTGAAAATGCATGCCTAA 1710 0.3713 MKVATKLCNLLFTTISFLLLFSGLGVDSMDYDYFATTKCITEPHKAQYGGGIIVNPDFDHNIENWTVFGNNGNRFIIASNRTQTLDSFSQKVLLKKELLYMFSAWIQLSEGSDIVSVVFNINGSELVRGGHVIAKNGCWSFLKGGIVANFSSSAEILFESNNPSVEIWADSVSLQPFTKEEWRSHQDNNIEKVRKSRVRFHVSNANETALEGAKVVIKQTKANFPFGCGMNQHILTNGDYRDWFVSRFKYTTFTNQMKWYSTEIIQGQENYTISDAMLKFTKENGICVRGHNIFWDDEKYQPEWVKSLSPDELREAAAKRIKSVVTRYKGELIAWDVVNENVHFHFYEDKLGENASELYYLRAYELDPTTTLFMNEYNTIEYSGDKVASPANYFNKLNEILQSPEASEMSFAIGLQCHFGSGRPNLAYMRSGLDFLGQIGFPIWLTETSVDPQPKQAEYFEEILREGYSHPAVKGIIMFAGPAQAGFNTTLLADENFKTTPTGKVVDKLISEWGIGPYTAIADHRGIVDIALHYGEYDVTVTHPLTQHSEKLNISVGKEFSHKNVKMHA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4910 569 SMART glyco_10 257 509 IPR001000 GO:0004553|GO:0005975
Psa6g4910 569 SUPERFAMILY Galactose-binding domain-like 49 176 IPR008979 -
Psa6g4910 569 Pfam Glycosyl hydrolase family 10 220 460 IPR001000 GO:0004553|GO:0005975
Psa6g4910 569 PANTHER GLYCOSYL HYDROLASE 36 562 IPR044846 GO:0004553|GO:0005975
Psa6g4910 569 Gene3D - 40 177 - -
Psa6g4910 569 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 36 562 - -
Psa6g4910 569 SUPERFAMILY (Trans)glycosidases 210 515 IPR017853 -
Psa6g4910 569 Gene3D Glycosidases 214 515 - -
Psa6g4910 569 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 211 509 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4910 Psa-Chr6 428367838 428370602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4910 28 556 Glycoside Hydrolase AT4G33840 50.000 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4910 - - gmx:100777980 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4910 6 428367838 428370602 Psa6g4910 6 428367838 428370602 ECH