Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4909 ATGCTCGAAAAAATTGCTATAAATTGGACGGTGCGTTATTGTTTGATTAGTCACAAGATGAAGGTTGTTGCAGTAGCAGCAGAGTTGTGCATTTTCTTGCTCTCCGCGTCTTGCCTTCTACTCCTTTCTTCAGGGTTTCTACTCCATTCTAAACCTTATGATTATTCTGCTACTACTCAGTGTGTGAAAGAACCTCATAGGGCACAATATGGAGGAGGCATTATAGTAAATCCAGGGTTTGATCATAACATTAAGGGTTGGACTGTGTTTGGAAATGGAACAATTGAGGAACGGATATCAAATGACGGCAATAGATTCATTGTTGCTCGCAACAGAACACGAGCATTGGATGGTTTCTCTCAGAAGGTTCATCTGAAGAAAGGACTGATATACATTTTTTCTGCTTGGCTTCAGCTGAGTGAAGGAAGTGAGATTGTTTCGGTTGTTTTTAAAACAAATGGAAGTGAATCGGTACATGGTGGTCATGTCATAGCCAACCATGGATGCTGGTCTCTGCTAAAAGGGGGCATTGTTGCTAACTTTTCAACCCCTGCTGAGATTCTTTTTGAGACTGAGAATCCAACTGTGGAATTATGGGCTGATAACGTGTCCTTACAACCATTCACCAGAAAGCAATGGAGATCACACCAAGACGACAGCGTTGAGAGGGTACGTAAGAGCAGGGTGAGATTCCAGGTAACTCATCCAAACGAAACAGTGTTGGAAGGAGCAACTGTTGTTATCAAACAAACAAGGGCAAATTTTCCATATGGGTGTGCGATGAACCATAATATCCTCACAAACAGTGAGTACCAGAAATGGTTTGTTTCAAGATTCAAATACACAACTTTCACCAATGAGATGAAATGGTATAGTACAGAGAAAATTCAAGGCAAGGAAGACTATACTATCCCAGATGCCATGTTACAATTTGCCAAAGAAAATGGCATTTCTGTGAGAGGTCATAACATTTTGTGGGACAGTGAAAAACGTCAACCTCACTGGGATTTGTCCCTGTCTCCAGACGAATTACGAGTAGCAGCTGAGAAAAGAATGAATTCTGTTGTCTCAAGGTATAAAGGACAACTTATTGCATGGGATGTCGTGAATGAGAATGTCCATTTCCACTTTTTTGAGGACAAACTCGGCGAAAATGTCTCTGCAGAATATTATTCAGCAGCTTACCATCTTGATCCAAACACCAAGATGTTCATGAATGAGTATAACACCATTGAGTTCAGCGGGGATAAGGATGCCAGCCCAGCCAACTATATCAGGAAACTTAAGGAGATTCAGCAATTTCCAGGAACTGCTGGAATATTACTAGCCATTGGGTTGCAATGCCATTTTTCAGTTGGTGTGCCAAACCTTGCTTACATGAGGTCAGGTCTAGATCTTCTTGCTGCAACCGGACTTCCCATATGGCTCACAGAAACCAGTGTGGATCCTCAGCCAAATCAGGCAGAGTACTTTGAACAGATACTAAGAGAGGGTTTCTCTCATCCTGCAGTTCAAGGGATTGTAATGTTTGTTGGACCAGCACAAGCTGGTTTCAACGACAGTACCTTACTTGCAGATGCAAATTTTAAAAATACTGCTGCCGGAGACGTTGTGGACAAGCTGATTCGCGAGTGGGGAACTGGTCCCCAAACAGCCATAGCAGATAGTAGAGGAATTATAGATATTTCACTACATCATGGAGATTATGATGTTACTTTTACACATCCTCTAACTCAATACTCCAAAACACTGAATATAAGTGTAAGGAAAGGATTTTCTTTGGAAACTGTCCATGTGAAAATGCATGCCTAA 1812 0.4161 MLEKIAINWTVRYCLISHKMKVVAVAAELCIFLLSASCLLLLSSGFLLHSKPYDYSATTQCVKEPHRAQYGGGIIVNPGFDHNIKGWTVFGNGTIEERISNDGNRFIVARNRTRALDGFSQKVHLKKGLIYIFSAWLQLSEGSEIVSVVFKTNGSESVHGGHVIANHGCWSLLKGGIVANFSTPAEILFETENPTVELWADNVSLQPFTRKQWRSHQDDSVERVRKSRVRFQVTHPNETVLEGATVVIKQTRANFPYGCAMNHNILTNSEYQKWFVSRFKYTTFTNEMKWYSTEKIQGKEDYTIPDAMLQFAKENGISVRGHNILWDSEKRQPHWDLSLSPDELRVAAEKRMNSVVSRYKGQLIAWDVVNENVHFHFFEDKLGENVSAEYYSAAYHLDPNTKMFMNEYNTIEFSGDKDASPANYIRKLKEIQQFPGTAGILLAIGLQCHFSVGVPNLAYMRSGLDLLAATGLPIWLTETSVDPQPNQAEYFEQILREGFSHPAVQGIVMFVGPAQAGFNDSTLLADANFKNTAAGDVVDKLIREWGTGPQTAIADSRGIIDISLHHGDYDVTFTHPLTQYSKTLNISVRKGFSLETVHVKMHA* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4909 603 SMART glyco_10 288 541 IPR001000 GO:0004553|GO:0005975
Psa6g4909 603 Pfam Glycosyl hydrolase family 10 251 488 IPR001000 GO:0004553|GO:0005975
Psa6g4909 603 SUPERFAMILY (Trans)glycosidases 241 548 IPR017853 -
Psa6g4909 603 SUPERFAMILY Galactose-binding domain-like 71 206 IPR008979 -
Psa6g4909 603 Gene3D - 62 208 - -
Psa6g4909 603 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 58 599 - -
Psa6g4909 603 Gene3D Glycosidases 244 548 - -
Psa6g4909 603 PANTHER GLYCOSYL HYDROLASE 58 599 IPR044846 GO:0004553|GO:0005975
Psa6g4909 603 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 242 541 IPR001000 GO:0004553|GO:0005975
Psa6g4909 603 Pfam Carbohydrate binding domain 73 180 IPR003305 GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4909 Psa-Chr6 428348889 428352961 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4909 49 588 Glycoside Hydrolase AT4G33840 52.302 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4909 - - mtr:MTR_1g106770 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4909 6 428348889 428352961 Psa6g4909 6 428348889 428352961 ECH