Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4908 ATGTTTCACATGCTGAAAACATTTGCTATAAATTGGACAGTGCATTTTGGTTTGATTAGTCACAAGATGAAGGTTGTTGCAGTAGCAGCAGAGTTGTGCATTTTCTTGCTCTCTGCGTCTTGCCTTCTACTCCTTTCTTCAGGGTTTCTACTCCATTCTAAACCTTATGATTATTCTGCTACTACTCAGTGTGTGAAAAAACCTCATAGGGCACAATATGGAGGAGGCCTTATAGTAAATCCGGAGTTTGATCATAACATTAAGGGTTGGACAGTCGTTGGAAATGGAACAATTGAGGAACGGATATCAAATGACGGCAATAGATTTATTGTTGCTCGCAACAGAACACGAGCATTGGATGGTTTCTCTCAGAAGGTTCATCTGAAGAAAGGACTGATATACATTTTTTCTGCTTGGCTTCAGCTGAGTGAAGGAAGTGAGATTGTTTCTGTCGTTTTTAAAACAAATGGAAGTGAATTGGTACATGGTGGTCATGTCATAGCCAACCATGGATGCTGGTCTCTGCTAAAAGGGGGCATTGTTGCTAACTTTTCAAGGCACGTTGAGATTCTTTTTGAGATTGAGAATCCAACTGTGGAACTAAGGGCTGATAGCGTGTCCTTGCAGCCATTCACCAGAAAGCAATGGAGATCACACCAAGACGACAGCGTTGAGAGGGTACGTAAAAGTAGGGTGAGATTCCAGATTACTCATCCAAACGAAACGGCGTTGGAAGGAGCAACCATTGTTATCAAACAAACAAGGGCAGATTTTCCATTTGGATGTGCGATGAACCATTACATCCTCACAAACAGTGAGTACCAGAAATGGTTTGTTTCAAGATTCAAATACACAACTTTCACCAATGAGATGAAATGGTATAGTACAGAGATAGTTCAAGGCCACGAAAACTATACCATCCCAGATGCCATGTTACAATTTTCTAAAGAAAATGGCATTTTTGTGAGAGGTCATAACATTTTGTGGGACAGTCCAAATCGTCAACCTCACTGGGATTTGACCTTGTCTCCTGAAGAATTACGAGTAGCAGCTGATAAAAGAATGAATTCTGTTGTCTCGAGGTATAAAGGACAAGTTATTGCATGGGATGTCGTGAATGAGAATGTCCACTTCCACTTTTTTGAGGACAAACTTGGCAAAAATGTCTCTGCAGAATATTATTTAGCAGCTTACCGTCTTGATCCAAACACTGAGATGTTCATGAATGAGTATAACACCATTGAGATCTGCGGGGATAAGAATGCCAGCCCAACCAATTATCTCAGGAAACTTAAGCAGATTCAGCAATTTCCAGGAATTGATGGAATATCATTGGCCATTGGGTTGCAAGCCCATTTTCCAAATCGTGCGCCAAACCTTGCTTACATGAGGTCAGGTCTAGATCTTCTTGCTGCAACTGGACTTCCTATATGGCTCACAGAAGTCAGCGTGAATGCTCAGCCAAAACAGGCAGAGTACTTTGAAGACGTACTAAGAGAGGGGTTCTCTCATCCTGCTGTTAAAGGGATCATAATGTTTGTAGGACCAGAACAAGCTGGCTTCGACAGTACATTACTTGCAGATGCAAATTTTAAAAATACTGCTGCGGGAGATGTTGTGGACAAGCTGATTCGCGAGTGGGGAACTGGCCCTCAAACAGCCATAGCTGATAGTAGAGGAATTATAGATATTTCACTGTATTATGGGGATTATGATGTTACTGTTACACATCCTCTAACCCATTACTCTAAAACACTGAATATAAGTGTAAGGAAAGGATTTTCTCTGGAAACTGTCCATGTGAAAATGGACGACTAA 1818 0.4125 MFHMLKTFAINWTVHFGLISHKMKVVAVAAELCIFLLSASCLLLLSSGFLLHSKPYDYSATTQCVKKPHRAQYGGGLIVNPEFDHNIKGWTVVGNGTIEERISNDGNRFIVARNRTRALDGFSQKVHLKKGLIYIFSAWLQLSEGSEIVSVVFKTNGSELVHGGHVIANHGCWSLLKGGIVANFSRHVEILFEIENPTVELRADSVSLQPFTRKQWRSHQDDSVERVRKSRVRFQITHPNETALEGATIVIKQTRADFPFGCAMNHYILTNSEYQKWFVSRFKYTTFTNEMKWYSTEIVQGHENYTIPDAMLQFSKENGIFVRGHNILWDSPNRQPHWDLTLSPEELRVAADKRMNSVVSRYKGQVIAWDVVNENVHFHFFEDKLGKNVSAEYYLAAYRLDPNTEMFMNEYNTIEICGDKNASPTNYLRKLKQIQQFPGIDGISLAIGLQAHFPNRAPNLAYMRSGLDLLAATGLPIWLTEVSVNAQPKQAEYFEDVLREGFSHPAVKGIIMFVGPEQAGFDSTLLADANFKNTAAGDVVDKLIREWGTGPQTAIADSRGIIDISLYYGDYDVTVTHPLTHYSKTLNISVRKGFSLETVHVKMDD* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4908 605 Pfam Carbohydrate binding domain 76 181 IPR003305 GO:0016798
Psa6g4908 605 Gene3D - 65 211 - -
Psa6g4908 605 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 61 601 - -
Psa6g4908 605 SUPERFAMILY (Trans)glycosidases 244 550 IPR017853 -
Psa6g4908 605 SUPERFAMILY Galactose-binding domain-like 74 209 IPR008979 -
Psa6g4908 605 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 245 543 IPR001000 GO:0004553|GO:0005975
Psa6g4908 605 Gene3D Glycosidases 247 550 - -
Psa6g4908 605 PANTHER GLYCOSYL HYDROLASE 61 601 IPR044846 GO:0004553|GO:0005975
Psa6g4908 605 Pfam Glycosyl hydrolase family 10 254 494 IPR001000 GO:0004553|GO:0005975
Psa6g4908 605 SMART glyco_10 291 543 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4908 Psa-Chr6 428309356 428312946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4908 52 590 Glycoside Hydrolase AT4G33840 50.000 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4908 - - mtr:MTR_1g106770 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4908 6 428309356 428312946 Psa6g4908 6 428309356 428312946 ECH