Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4820 ATGAGGCTAAACGGAGAGTTTTCGAGCGGCGAAGAAGAAGAAGTAATGGAGAAATCTGAGGTCGGTACGACGCCGTTTTCGGGACAGAAAGTTGTTGTTGGGTATGCGTTAACGGCTAAGAAGAAGAAAAGCTTTCTGCAACCGAATTTCATTTCTCTTGCAAGGAGCAAGGGCATATACTTTGTTGCTATTGATGTGAACAAACCACTGTCAGAACAAGGTCCATTTGATATTGTCTTGCATAAGTTGTCAGGAGAGGAATGGCGTGATATTATCGAGGATTTCAGGCAAAAACATCCCGATGTAATTGTTCTTGATCCCCCAGATGCAATTCAACATTTACACAATCGCCAATCCATGCTTCAAGATGTGGTGGATCTAAACTTATCTGAGAGCTACGGCAAGGTTGGCATCCCTAGTCAGCTAGTTATCACAAAAGACAAAGACTCATCTAGTATCCCATATGAAGTCACCAAAGCTGGGTTGAAGTTGCCATTAGTTGCGAAACCTCTAGTTGTTGATGGCACTGCAAAGTCACATGAACTATTTCTTGCTTATGATGAGTTCTCTCTTTCAGAGCTTGAACCTCCTCTGGTTCTACAAGAGTTTGTGAATCATGGCGGTCTTCTCTTTAAGATCTATATTGTTGGGGAAAGCATAAAGGTTGTGAGGCGTTTCTCTCTTCCCAATATCAGTAAACGCGAGCTATCAAAAGTCGCTGGTGTATACCGTTTTCCAAGAGTTTCATGTGCAGCAGCTTCTGCAGATGATGCCGATCTAGATCCTAGTATTGCCGAACACCCACCAAGATCTTTGTTGGAAAAGCTTGCAAAGGAGCTTCGACATAGATTGGGACTTCGAATGTTCAACGTAGATATGATTCGAGAATACGGGACCAAGGATGTATTTTATGTCATTGACATCAACTACTTTCCAGGGTATGGAAAAATGCCAAACTACGAGCCTGTATTTACGGATTTTCTACTTAACCTAATGCAGAACAAATGTAAGAAGAAACTTACTGTCTAA 1029 0.4189 MRLNGEFSSGEEEEVMEKSEVGTTPFSGQKVVVGYALTAKKKKSFLQPNFISLARSKGIYFVAIDVNKPLSEQGPFDIVLHKLSGEEWRDIIEDFRQKHPDVIVLDPPDAIQHLHNRQSMLQDVVDLNLSESYGKVGIPSQLVITKDKDSSSIPYEVTKAGLKLPLVAKPLVVDGTAKSHELFLAYDEFSLSELEPPLVLQEFVNHGGLLFKIYIVGESIKVVRRFSLPNISKRELSKVAGVYRFPRVSCAAASADDADLDPSIAEHPPRSLLEKLAKELRHRLGLRMFNVDMIREYGTKDVFYVIDINYFPGYGKMPNYEPVFTDFLLNLMQNKCKKKLTV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4820 342 MobiDBLite consensus disorder prediction 1 19 - -
Psa6g4820 342 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 2 1 339 - -
Psa6g4820 342 Gene3D - 144 242 - -
Psa6g4820 342 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 160 324 - -
Psa6g4820 342 MobiDBLite consensus disorder prediction 1 21 - -
Psa6g4820 342 ProSiteProfiles ATP-grasp fold profile. 130 337 IPR011761 GO:0005524|GO:0046872
Psa6g4820 342 Gene3D - 16 133 - -
Psa6g4820 342 PIRSF ITPK 9 342 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Psa6g4820 342 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 32 111 IPR041429 -
Psa6g4820 342 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 339 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Psa6g4820 342 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 131 329 IPR040464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4820 Psa-Chr6 420246987 420251099 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4820 K00913 - gmx:100127410 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4820 6 420246987 420251099 Psa6g4820 6 420246987 420251099 ECH