Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4614 ATGGCTTTCTGTTACAGACTCGACAACTTCATCATCTCTGCGTTTAAACCCAAACACTCAAATGTCCCACTTTCAATTCATCATTCATCATCCAATTTTCCTTCTTTCAAAGTTCAAAACTTTCCTTTCAGGGTTCGCTATAATTCAGCTATTAGAGCCACTTCGTCTTCCTCTTCTACTCCCACAACCATTGCAGAACCTAATGACATTAAGATTAACTCTATTCCTACTAAACCTATTGAAGGACAAAAAACTGGTACCAGTGGCCTAAGAAAAAAGGTGAAAGTGTTTAAGCAAGAAAATTACCTTGCAAATTGGATTCAGGCACTGTTTAATTCGTTGCCGCCGGAGGATTACAAGAATGGATTGTTGGTTTTGGGAGGCGATGGTCGATACTTCAATAAAGAAGCTGCACAGATAATAATCAAGATTGCTGCTGGAAATGGTGTTGGAAAAATTCTGGTTGGGAAGGAAGGGATATTGTCAACGCCAGCCGTTTCTGCTGTGATAAGGAAGAGAGAGGCAAATGGTGGGTTTATCATGAGTGCGAGCCATAACCCTGGTGGACCTGAATATGATTGGGGTATTAAGTTTAATTACAGTAGCGGACAACCTGCACCAGAATCCATCACCGACAAGATTTACGGAAACACCCTATCTATTTCTGAGATAAAGATTGCTGATATTCCCGACGTTGACTTATCAAATGTTGGAGTTACGAAATTCGGAAGCTTCAGTGTGGAAGTAATTGACCCAGTTTCTGATTACCTGGAGTTATTAGAGACAGTGTTCGATTTTCAGCTAATCAAAAGTCTTATTTCACGGCCAGATTTTAGGTTTACATTTGATGCCATGCATGCCGTTGCTGGTGCTTATGCAACACCCATTTTCGTTGATAAACTTAGTGCTAGTCTGGATTCAATTTCAAATGGAATACCTTTGGAAGATTTTGGACACGGTCATCCTGATCCTAATCTAACATACGCAAAGGATCTTGTCAAGATTATGTATGCTGAAAACGGACCTGATTTTGGTGCCGCTAGTGATGGTGATGGTGATAGAAATATGATTTTGGGAACAAGTTTCTTCGTAACTCCTTCAGACTCTGTAGCCGTTATTGCAGCCAATGCAAAAGAAGCGATTCCGTACTTTAAGGACAGTATCAAGGGTCTTGCACGATCAATGCCGACAAGCGGTGCTCTAGATAGAGTTGCTGAAAAGTTGAACCTCCCTTTTTTTGAGGTTCCCACTGGTTGGAAATTCTTTGGTAATCTTATGGATGCTGGAAATCTGTCGATTTGCGGGGAAGAGAGTTTTGGAACAGGTTCTGACCACATTCGTGAGAAAGACGGAATCTGGGCTGTATTAGCTTGGCTTTCGATTATTGCTCACCGCAACAAAGACACGAAACCAGGGGAGAAATTGGTCTCTGTGTCTGATGTTGTGAAGGAGCATTGGGCAACCTATGGTAGAAATTTCTTTTCTAGATACGATTACGAGGAATGTGAATCTGAAGGCGCGAATAAGATGATAGAGTACCTACGAGAGCTTTTGTCTAAGAGCAAGCCTGGTGATAAGTATGGAAGTTACGTCCTCCAGTTTGCCGATGATTTTACATACACTGATCCTGTAGATGGAAGTGTAGTATCAAAACAAGGGGTTCGGTTTGTTTTCACCGATGGTTCAAGAATTATTTATCGTTTATCAGGAACGGGTTCTGCTGGTGCAACTGTTAGAGTGTATATCGAACAGTTTGAACCAGATGTTTCTAAACACGACGTCGATGCTCAAATTGCCTTGAAACCATTAATAGATTTAGCATTATCTGTTTCAAAGCTCAAAGACTTCACAGGGAGAGAGAAGCCTACAGTCATCACTTAA 1881 0.412 MAFCYRLDNFIISAFKPKHSNVPLSIHHSSSNFPSFKVQNFPFRVRYNSAIRATSSSSSTPTTIAEPNDIKINSIPTKPIEGQKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNGLLVLGGDGRYFNKEAAQIIIKIAAGNGVGKILVGKEGILSTPAVSAVIRKREANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADIPDVDLSNVGVTKFGSFSVEVIDPVSDYLELLETVFDFQLIKSLISRPDFRFTFDAMHAVAGAYATPIFVDKLSASLDSISNGIPLEDFGHGHPDPNLTYAKDLVKIMYAENGPDFGAASDGDGDRNMILGTSFFVTPSDSVAVIAANAKEAIPYFKDSIKGLARSMPTSGALDRVAEKLNLPFFEVPTGWKFFGNLMDAGNLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDTKPGEKLVSVSDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRELLSKSKPGDKYGSYVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDVSKHDVDAQIALKPLIDLALSVSKLKDFTGREKPTVIT* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4614 626 Gene3D - 472 626 - -
Psa6g4614 626 PRINTS Phosphoglucomutase/phosphomannomutase family signature 177 191 IPR005841 GO:0005975|GO:0016868
Psa6g4614 626 PRINTS Phosphoglucomutase/phosphomannomutase family signature 277 296 IPR005841 GO:0005975|GO:0016868
Psa6g4614 626 PRINTS Phosphoglucomutase/phosphomannomutase family signature 313 326 IPR005841 GO:0005975|GO:0016868
Psa6g4614 626 PRINTS Phosphoglucomutase/phosphomannomutase family signature 342 357 IPR005841 GO:0005975|GO:0016868
Psa6g4614 626 SUPERFAMILY Phosphoglucomutase, first 3 domains 72 284 IPR016055 GO:0005975|GO:0016868
Psa6g4614 626 Gene3D - 71 259 - -
Psa6g4614 626 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 46 626 - -
Psa6g4614 626 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 255 358 IPR005845 GO:0005975
Psa6g4614 626 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 178 187 IPR016066 GO:0000287
Psa6g4614 626 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 46 626 IPR045244 GO:0004614|GO:0005975
Psa6g4614 626 SUPERFAMILY Phosphoglucomutase, C-terminal domain 491 626 IPR036900 GO:0016868|GO:0071704
Psa6g4614 626 SUPERFAMILY Phosphoglucomutase, first 3 domains 350 496 IPR016055 GO:0005975|GO:0016868
Psa6g4614 626 Gene3D - 260 362 - -
Psa6g4614 626 Gene3D - 363 461 - -
Psa6g4614 626 CDD PGM1 75 626 - -
Psa6g4614 626 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 83 222 IPR005844 GO:0005975|GO:0016868
Psa6g4614 626 SUPERFAMILY Phosphoglucomutase, first 3 domains 254 363 IPR016055 GO:0005975|GO:0016868
Psa6g4614 626 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 549 601 IPR005843 GO:0016868|GO:0071704
Psa6g4614 626 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 366 489 IPR005846 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4614 Psa-Chr6 402046690 402052004 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4614 K01835 - gmx:100802730 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4614 6 402046690 402052004 Psa6g4614 6 402046690 402052004 ECH