Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4607 ATGGGAGACAGAAAAGGAACAACAGCTCTTAGCAAAACTGCGCCAAAATGGCCTTCCATCAAACCCAAAAGCAATCTTCAAATCACCACCTTGCGAGATTTCGATCTATTCACGGTTCGGAATTTTTTCTCCTCTGCTGAATCAAAGGCGTTCGTTGAAACTGCTGAGGGAATTGGTTTCGCTCATCAAGGGAGTTTAGGTCCAGCTAAAGGTGAAGCTTACCGAGATAATGATCGAATCTCGGTGAACGATTCGGTTCTTGCTGATTCAATCTGGAACTCTGGACTTAACAAAATGTTTTCTGATATAAGAATTCGTGGGAAATCGGCTGTAGGTTTGAATCCAAATATTAGATTATATAGGTACAACGTTGGTCAACGGTTTGGACGACATATTGATGAGAGTGTTGATCTTGGAGATGGAAAAAGGACTCGTTATACTTTGCTAGTTTATTTAAGCGGTGGATCCGGGGAACTTAAATCAAAGCATAAAAATGATTCCGGCAAACCTATAGAGTCATCTTTTGAACGTTTGGTTGGAGGAGAAACAGTATTTTATGGTTCAAGAAATAGCACCGTGGCTGAGGTTGCTCCCATTGAAGGGATGGCACTCTTGCACATTCATGGAGATAAATGCTTGTTGCATGAAGCCAGAAACGTTACAAAGGGTGTCAAATATGTGTTTCGTTCGGATGTTGTATTTGCTTGA 708 0.4124 MGDRKGTTALSKTAPKWPSIKPKSNLQITTLRDFDLFTVRNFFSSAESKAFVETAEGIGFAHQGSLGPAKGEAYRDNDRISVNDSVLADSIWNSGLNKMFSDIRIRGKSAVGLNPNIRLYRYNVGQRFGRHIDESVDLGDGKRTRYTLLVYLSGGSGELKSKHKNDSGKPIESSFERLVGGETVFYGSRNSTVAEVAPIEGMALLHIHGDKCLLHEARNVTKGVKYVFRSDVVFA* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4607 235 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 112 235 IPR005123 -
Psa6g4607 235 SMART p4hc 34 233 IPR006620 GO:0005506|GO:0016705|GO:0031418
Psa6g4607 235 Gene3D q2cbj1_9rhob like domain 23 230 - -
Psa6g4607 235 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 11 235 - -
Psa6g4607 235 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 11 235 IPR045054 -
Psa6g4607 235 Pfam 2OG-Fe(II) oxygenase superfamily 118 227 IPR044862 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4607 - - gmx:100526938 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4607 6 401508005 401509645 Psa6g4607 6 401508005 401509645 ECH