Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4604 ATGGGTTGGTTCTTGGAACACTTTATAAGGTTATTTCTTGCTGGAAGCTTGTTCTTTAATGGCTTATCTTATTCTTATAAAGCTCAAAAGTACAGATTTATCAAAGAAGCAACGGTTGCTCCTCCAAGCTCAACATATGACTACATAGTAATTGGTGGAGGATCATGTGGTTGTCCACTAGCAGCCACACTTTCACAAGGTGGAAGAGTTTTACTCCTTGAAAGAGGAGGTTCACCATACACAAATCCAGAAGAAATCAACATACATAAATTTGTTCATTCTCTAGCCGACACGAGTCCATTGTCGTTCTCCCAACAATTCATTTCGACCGACGGTGTACTCAATTCGCGCGCTCGCGTCCTAGGAGGCGGTTCTGTCTTGAACGCCGGATTCTACTCGAGGGCTAGCAATAGTTACATAAGAGCATCCGGTTGGAATGAAAGTTTGGCCAAGAGTTCATATAAATGGGTTGAAAAGAAAGTTGCTTTTGAGCCTCCAATGATGCAATGGCAAACAGCAGTGAGGGATGGTTTGCTTGAAGCAGGGGTTTTACCTTACAACGGTTTTACTTTTGATCATTTGTATGGGACTAAGGTTGGAGGGTCCATTTTTGATAAGGAGGGTCATAGACACACTGCTGCTGATTTGTTAGTGTATGCTGATCCAAGAAAAATTTCTGTTTATTTGCATGCCACAGTTCAAAAGATACTATTTAGGTATAATGAAGAAAAAAGGAAGCCACAAGCTTATGGAGTGATATTCAAAGATGCATTAGGAATCATACATAGAGCATACATAAGCTCCAAAATGAAGAATGAAATAATAGTATCAGCTGGTGCAATTGGAAGTCCACAGCTTCTGATGCTAAGTGGCATTGGTCCTGCTAACCATCTTAAATCACATGGTATTCAAGTTGTTTTGGATCAACCTTTGGTTGGTCAAGGGATGGCTGATAATCCGATGAATGTTCTAATCGTTCCGTCTCCTTTACCTGTTGAAGTTTCTCTCATTCAAACAGTTGGAATCACCAGGTCTGGTAGCTTCATCGAATCGGCCAGTGGCTTGGGCTTTGGTCATTCTTGGACTGACCGGCTTCAAGGGATTTTCGAATTTGTGTCAAACAAGAGTGGCCTACCGTCCAAGTCTGCGCCAGAAGCAATGGACAGTGTTGCAGACACGATTAGATCATTAGCGAATCCGGTTCTAAAAGGAGGAGTCATACTCGAAAAGATAATGGGACCGAGATCCACAGGTCACCTAGAACTCCTAACAACTAACCCCAACGATAATCCATCGGTTACGTTTAACTATTTCAAAGATCCACAAGACTTGAGAATGTGTGTCGAAGGCATGAAAACAATCATAAACGTGATAAACTCAAAAGCATTCTCGAGATTTCGCTACCACAACATGCCTGTACAATCTCTATTTGACTTGATGTTACATTTATCGGTTAACTTGAGACCGAAGCATCCTAGTGCTGCGTTTTCTTTGGAACAATATTGTATCGACACTGTCTTAACAATTTGGCATTATCATGGTGGTTGCCAACAAGGTAAAGTTGTTGATCTTAATTATAAAGTCAAAGGGGTTGAAGCACTTAGAGTAATCGATGGTTCCACTTTTTATCGATCACCGGGGACTAATCCTCAAGCTACCGTAATGATGCTCGGAAGGTATATGGGACAAAAGATCTTAAAGAAAAGACTCTCTCAGGGGAGGAAGTGA 1728 0.4138 MGWFLEHFIRLFLAGSLFFNGLSYSYKAQKYRFIKEATVAPPSSTYDYIVIGGGSCGCPLAATLSQGGRVLLLERGGSPYTNPEEINIHKFVHSLADTSPLSFSQQFISTDGVLNSRARVLGGGSVLNAGFYSRASNSYIRASGWNESLAKSSYKWVEKKVAFEPPMMQWQTAVRDGLLEAGVLPYNGFTFDHLYGTKVGGSIFDKEGHRHTAADLLVYADPRKISVYLHATVQKILFRYNEEKRKPQAYGVIFKDALGIIHRAYISSKMKNEIIVSAGAIGSPQLLMLSGIGPANHLKSHGIQVVLDQPLVGQGMADNPMNVLIVPSPLPVEVSLIQTVGITRSGSFIESASGLGFGHSWTDRLQGIFEFVSNKSGLPSKSAPEAMDSVADTIRSLANPVLKGGVILEKIMGPRSTGHLELLTTNPNDNPSVTFNYFKDPQDLRMCVEGMKTIINVINSKAFSRFRYHNMPVQSLFDLMLHLSVNLRPKHPSAAFSLEQYCIDTVLTIWHYHGGCQQGKVVDLNYKVKGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGQKILKKRLSQGRK* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4604 575 SUPERFAMILY FAD-linked reductases, C-terminal domain 316 515 - -
Psa6g4604 575 SUPERFAMILY FAD/NAD(P)-binding domain 37 569 IPR036188 -
Psa6g4604 575 PANTHER OSJNBA0019K04.7 PROTEIN 4 569 - -
Psa6g4604 575 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Psa6g4604 575 Gene3D - 46 558 IPR036188 -
Psa6g4604 575 ProSitePatterns GMC oxidoreductases signature 2. 279 293 IPR000172 GO:0016614|GO:0050660
Psa6g4604 575 Gene3D - 163 508 - -
Psa6g4604 575 PIRSF Alcohol_oxidase 26 575 IPR012132 GO:0050660
Psa6g4604 575 Pfam GMC oxidoreductase 46 320 IPR000172 GO:0016614|GO:0050660
Psa6g4604 575 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 4 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4604 Psa-Chr6 400223336 400225795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4604 8 569 Miscellaneous Gene Families AT5G51950 58.803 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4604 - - gmx:100780453 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4604 6 400223336 400225795 Psa6g4604 6 400223336 400225795 ECH