Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4554 ATGTTCAAATCATGGAGCAAGAAAAACAAGATCAAAGCTGTGTTCAAATTGGATTTTCAAGCAACCCAGGTTCCGAAGATGAAAAAGTCTGCCCTGATGGTATCTTTGGTACCAGATGATGTTGGGAAAACAACGGTGAAATTAGAGAAAACTGCTGTACAAGATGGGACTTGTTTATGGGAGAATCCAATTTTTGAACCGGTTAAACTTGTTAGGGATTCAAAATCAGGAATTCTCCATGAGAAAATCTACCACTTCATTGTTTCAACTGGTTCTTCGAAATCCGGCTATTTGGGAGAAGCTTCTGTTGATTTTGCCGATTTTTTAGCAGAAACTGAGCCAGTTACTGTTTCTCTACCATTGAAATTTGCCAATTCAGGCGTAGTTTTACATGTAACTATTCAGAATGTTGAAGGATATGCTGCTGAAAGAAACGGGGAAGATAATGGAGCTGCGGGACTTCATAATGACGGAAGCTTGAGACATCAATTGAGCTATGGCAGTACAGAAGAAAGTTACAATCTTGATGAAAATGAGAACGTGGCCAAGAGTAGATCCGAGTATTCTGAACAGAATGCATCTAATGGCATCAGTCCTAAGGTAGCTTCATGGGATGATCCTCATAGCTTCAGACAGAACTCGATGCCACCTAGAGGACCGGTTGACACCAACGCAACACAAAATCAAGTGCATAAGAGGTCAAATACAGGATGGTCGATTGGTTCAGCATCAGATGGAAGTTTAGGTGACTGGACAAACAGCGCGGAAGAGAATATTCCAAGAGAAAGATTGCAAGAGGCTTCCGGCAATGCCGCTGAAGATCTCAAAAGTGAAATTGCTTCTCTGAAGAGGCAGGCAGAACTATCGGAACTGGAGTTACAAGCGCTTCGGAAGCAAGTAGAAAAAGAAAGCAGTCGGGGGCAGAATTTATCGAGACAAATCAACGGTCTCAGAGACGAGAGAGATTCATTGAAAACTAAATATGAGCAACTCAGGTCCCAACAGAACTTCAATAGTGTTAACAATGAGACCAAAACCTCTAAAACCTTGAAGTCTGATGTTGAAAATACTAGGATTCAGTTAGAGGCATTAAAGGAAGAGCTTGTTTATGAAAAAGAAACAAGTGGAAATCTTCAGTTGCAACTGCTGAAAACACAGAACTCAAATTCTGAACTTCTTTTGGCTGTGACAGACCTTGAAGAAATGCTAGAACAAAAGAACGAGGAAATATTGGATCTATCATCCAAAATGAAATCTCAAAAGATTGCTGAAGAGCGTGATATTGACACAGAATTAGATGTTTTGCGGCAGAAAGTTGCAGAACAGAATAGTGAAATAGAGAGTTGCGGTAAACAACGCGAGGAGCTAAGCACGCTTTTAAAAGAGCTCACATTGGAGTATGATATTCTTGAGAATGAAAATGAGGATATCTCTACAAGATTAAAGCAAGAGGAAGCACAACACATCATGTTAAAAAATGAGCATTCAGCTTCTTTAGTTACGATACAACAACTTGAATCCCAAGTAAAGAGACTCGAAGAAAAGATAGAGATGCAGGAAGATGAATTTTCATCATCTTTGGTCTCCATCAAGGAACTTGAAAATGAAGTTAAGTCTTTAGAGAAAGAACTGAGAATTCAGGCAGATAAATACAAAGAAGATCTCCATGCCATGCAAAGTGCGATAACCGAGCAGGAAGAACGGGCCATACAAGCAGAAGAATCACTGAGAAAAACGAGACACAATAATGCTGTCGCATCTGAACGTCTTCAGGAGGAATATAAATCACTTTCTATTGAAATGGCATGCAAAGTTGAAGAGAACGAGAAGATGATCGCGAAAGAAGTTGCAGAAGCTGATGAATTGCGAAACCACAACAAGCTTATGGAAGAAACGCTCCAGAAATGCAATCAAGAACTCAGGCTTATTACAGATCAGCATGAATCGAAAGTGGAAGAGCTCTTGAAACAAATAATTTCTAAAGAAAAAACAATAGAACAGATGTCACGAGAGCTAGAAGTAAAGACTAAAGAACTCGAGGATGCACAAAGGCTCAGGGATGAAAAGGATGGTACATTTTCAAAGAAAATTCAAATGCTTGAGATCCAGCATAATGAAATAAAACACAGTTTGCAGAGAGAACAAGTGGACAAAGAAAATATGAAGAAACATATATCTCAGTTAGAAGGAGAGCTTAAGAAGAAAGAAGCAGAACTAAGTGCTATGGAAAAGAAGCTCAAGAATAACAAAGGACGAGGTGCAGCATTACATATGAATTTGATTTCAAGAGAAAATGAGGCTGCTAAGGGTAATGTTAAGAAGTCAAAATCAGAAATACATAAGGGAAATGATGCTGCAAACACTTCTATTAGCAAGTCCGAAGAAAGTGATGCTGAACGCCTTTCAAAGGAATTATTGAAAGAAGTGGAAATTCTAAAGGGAAAGAACACAACTATGGAAACTGAACTGAAAGAAATGGAAGAAAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAACTTGTTATGGCTGTACGCAATCTCAAGAATGGTAAGAAGATCTAG 2583 0.3895 MFKSWSKKNKIKAVFKLDFQATQVPKMKKSALMVSLVPDDVGKTTVKLEKTAVQDGTCLWENPIFEPVKLVRDSKSGILHEKIYHFIVSTGSSKSGYLGEASVDFADFLAETEPVTVSLPLKFANSGVVLHVTIQNVEGYAAERNGEDNGAAGLHNDGSLRHQLSYGSTEESYNLDENENVAKSRSEYSEQNASNGISPKVASWDDPHSFRQNSMPPRGPVDTNATQNQVHKRSNTGWSIGSASDGSLGDWTNSAEENIPRERLQEASGNAAEDLKSEIASLKRQAELSELELQALRKQVEKESSRGQNLSRQINGLRDERDSLKTKYEQLRSQQNFNSVNNETKTSKTLKSDVENTRIQLEALKEELVYEKETSGNLQLQLLKTQNSNSELLLAVTDLEEMLEQKNEEILDLSSKMKSQKIAEERDIDTELDVLRQKVAEQNSEIESCGKQREELSTLLKELTLEYDILENENEDISTRLKQEEAQHIMLKNEHSASLVTIQQLESQVKRLEEKIEMQEDEFSSSLVSIKELENEVKSLEKELRIQADKYKEDLHAMQSAITEQEERAIQAEESLRKTRHNNAVASERLQEEYKSLSIEMACKVEENEKMIAKEVAEADELRNHNKLMEETLQKCNQELRLITDQHESKVEELLKQIISKEKTIEQMSRELEVKTKELEDAQRLRDEKDGTFSKKIQMLEIQHNEIKHSLQREQVDKENMKKHISQLEGELKKKEAELSAMEKKLKNNKGRGAALHMNLISRENEAAKGNVKKSKSEIHKGNDAANTSISKSEESDAERLSKELLKEVEILKGKNTTMETELKEMEERYSEISLKFAEVEGERQQLVMAVRNLKNGKKI* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4554 860 MobiDBLite consensus disorder prediction 765 799 - -
Psa6g4554 860 Gene3D - 423 591 - -
Psa6g4554 860 Coils Coil 389 423 - -
Psa6g4554 860 PANTHER BNAC08G20130D PROTEIN 700 859 - -
Psa6g4554 860 PANTHER BNAC08G20130D PROTEIN 1 702 - -
Psa6g4554 860 Coils Coil 265 334 - -
Psa6g4554 860 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 702 - -
Psa6g4554 860 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 700 859 - -
Psa6g4554 860 Coils Coil 711 752 - -
Psa6g4554 860 MobiDBLite consensus disorder prediction 215 249 - -
Psa6g4554 860 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Psa6g4554 860 Coils Coil 587 685 - -
Psa6g4554 860 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Psa6g4554 860 Coils Coil 432 582 - -
Psa6g4554 860 MobiDBLite consensus disorder prediction 767 781 - -
Psa6g4554 860 Coils Coil 809 843 - -
Psa6g4554 860 MobiDBLite consensus disorder prediction 166 202 - -
Psa6g4554 860 Coils Coil 347 374 - -
Psa6g4554 860 MobiDBLite consensus disorder prediction 185 199 - -
Psa6g4554 860 MobiDBLite consensus disorder prediction 216 249 - -
Psa6g4554 860 MobiDBLite consensus disorder prediction 300 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4554 Psa-Chr6 396886848 396892732 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4554 - - cam:101499984 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4554 6 396886848 396892732 Psa6g4554 6 396886848 396892732 ECH