Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4485 ATGAAGAGTCACACAATATTCCTAATTAGAATCATTTTACTTTTCATGTTTCTTGGATCTTTAACAGTTTGGATCTTGTTGCCAACAAAGATCTACCGCAACACATGGACTGTCACCCTAGAAAACAAGCTCAACTCTACATACTTCAGAGAGCAAGGGGTAAATCTCTTGCTTTTTACATTTCCTATTATGTTTATTGGAGCTCTTGGTGGTATTTATCTCCATCTTCATCAGGAACATATAACACAAAACTTACCCTCCACAAGTGGTGGTGCTCTAAAAAGATTAATATGTTTCCTGAGACGTCCATTTCTGGTGATGTCTCCATTTGGAATAGTTTCAGCTATGGAGCTTTGTTTTGCACTCATGTTTGTTGCACTTTTGATATGGTCTCTTGGTAATTACTTATATATTAGTTTTGGTCACCTCCATATGCACAAAGCAGGAGAGAAAGTATGGGAAGCGAAGTTTAGGAGTGTATCATTGAGACTTGGTTACATAGGAAACATATGTTGGGCATTTTTGTTCTTTCCGGTGACAAGAGGGTCTTCAATTCTGCGTCTGGTTGGACTCACTTCTGAGTCAAGCATCAAATACCATATATGGCTTGGACATTTATCGATGGTTCTTTTTGCTGCTCATACTATTGGTTTTATCATCTATTGGGCCATCACCAATCAAATGATTGAGATGCTAGAGTGGAGCAAAACTTATGTCTCCAATGTAGCTGGAGAGATTGCAAGTTTAATAGCACTAGTAATGTGGATAACGAGTATTTCACGCATAAGGCGTAAAATGTATGAAGTATTCTTCTACACTCACCATCTCTACATTCTCTATATCTTATTCTATGCAATCCATGTTGGAGTTGAATACATGTGCATGATTGCTCCTGGGATTTTCCTATTCCTCATTGATAGACATCTTAGATTCTTACAATCTCGCCAAAATGCTCGGTTATTATCGGCTCGCATTTTGCCTTGTGATGCACTTGAGCTCAACTTCTCCAAGAATCCTAGTTTATACTATAACCCCACAAGCTTGGTGTTCATAAATGTTCCAAAAGTTTCCAAGCTGCAATGGCACCCTTTTACAGTGACTTCTAGTTGTAATATGGAAACTAATAATCTCAGTGTTACCATAAAAAATGTTGGTAGCTGGTCAAACACGCTTTATCAACAACTTTCATCTTCATCTTTGGAACATCTTAATGTTTCAGTTGAAGGACCCTATGGACCTCACACTAAACAATTTCTAAGGCATGAACAGATTGTGATGGTAAGTGGTGGAAGTGGCATAACTCCGTTCATATCGATAATTCGAGATCTCATATTTCAAAGCCAACAGCAACAATTCCAAGCTCCAAAACTCCTACTTGTTTGTGTTTTCAAGAATTATGTTGATCTAACAATGTTAGAACTTATGCTTCCTGCTTCTGCTTCTGGTTCAACAACTCAAATCTCAAACCTTCATTTACAAATCGAAGCTTACATCACGAGAGAAAAACAAGAACCTTCAACAGAAACTCAAAAACCTATCCAAACAATATGGTTTAAGCCAAACCTCTCAGATTCTCCTATCTCACTTGTATTAGGCCCAAATAATTGGTTATGGCTTAGTGCCGTAATCACGTCATCTTTCATCATGTTTCTTCTTCTTTTAGGAATTTTAACTCGTTACTATATTTATCCGATGGAGAAGAACTCGAGTGAAGTGTATAATTGGACATTCAAGGTTATGTGGTACATGTTTCTAATCTGTGCATGCATATGTGTATGTTCTAGTGTTGCTTTTCTTTGGTGGAAAAGACAAAACACTTTAGAAAATAAGCAAATAAATGTAGAAGTTTCAACACCAACAAGAGAACTTGAAAGCATTCCTCATCAATCTTTAGTGGAAGCTACCAATGTACATTTTGGTGCAAGACCTGATCTAAAAAAAATTATGTTTGAGTTTGAATGCAAAGATGTTGGAGTCATGGTATGTGGTCCAAGAAAATTGAGACATGAAGTTGCCAAAATTTGTGCTTCTGGTTTAGCTGATAATCTTCACTTTGAATCCATCAGCTTTAATTGGTGA 2079 0.3699 MKSHTIFLIRIILLFMFLGSLTVWILLPTKIYRNTWTVTLENKLNSTYFREQGVNLLLFTFPIMFIGALGGIYLHLHQEHITQNLPSTSGGALKRLICFLRRPFLVMSPFGIVSAMELCFALMFVALLIWSLGNYLYISFGHLHMHKAGEKVWEAKFRSVSLRLGYIGNICWAFLFFPVTRGSSILRLVGLTSESSIKYHIWLGHLSMVLFAAHTIGFIIYWAITNQMIEMLEWSKTYVSNVAGEIASLIALVMWITSISRIRRKMYEVFFYTHHLYILYILFYAIHVGVEYMCMIAPGIFLFLIDRHLRFLQSRQNARLLSARILPCDALELNFSKNPSLYYNPTSLVFINVPKVSKLQWHPFTVTSSCNMETNNLSVTIKNVGSWSNTLYQQLSSSSLEHLNVSVEGPYGPHTKQFLRHEQIVMVSGGSGITPFISIIRDLIFQSQQQQFQAPKLLLVCVFKNYVDLTMLELMLPASASGSTTQISNLHLQIEAYITREKQEPSTETQKPIQTIWFKPNLSDSPISLVLGPNNWLWLSAVITSSFIMFLLLLGILTRYYIYPMEKNSSEVYNWTFKVMWYMFLICACICVCSSVAFLWWKRQNTLENKQINVEVSTPTRELESIPHQSLVEATNVHFGARPDLKKIMFEFECKDVGVMVCGPRKLRHEVAKICASGLADNLHFESISFNW* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4485 692 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 405 478 IPR039261 -
Psa6g4485 692 PANTHER FERRIC REDUCTION OXIDASE 4-RELATED 9 691 - -
Psa6g4485 692 Gene3D - 598 691 IPR039261 -
Psa6g4485 692 SFLD Ferric Reductase Domain 28 692 - -
Psa6g4485 692 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 313 417 IPR017927 GO:0016491
Psa6g4485 692 Pfam FAD-binding domain 317 414 IPR013112 GO:0016491
Psa6g4485 692 CDD NOX_Duox_like_FAD_NADP 320 500 - -
Psa6g4485 692 Pfam Ferric reductase like transmembrane component 165 283 IPR013130 -
Psa6g4485 692 Pfam Ferric reductase NAD binding domain 421 676 IPR013121 GO:0016491
Psa6g4485 692 SFLD Ferric reductase subgroup (FRE) 13 692 - -
Psa6g4485 692 PRINTS Cytochrome B-245 heavy chain signature 242 265 IPR000778 GO:0016020|GO:0016491
Psa6g4485 692 PRINTS Cytochrome B-245 heavy chain signature 267 287 IPR000778 GO:0016020|GO:0016491
Psa6g4485 692 PANTHER NADPH OXIDASE 9 691 - -
Psa6g4485 692 Gene3D - 405 535 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4485 Psa-Chr6 392716917 392722302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4485 8 692 Miscellaneous Gene Families AT5G23980 56.818 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4485 K00521 - gmx:112998154 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4485 6 392716917 392722302 Psa6g4485 6 392716917 392722302 ECH