Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4482 ATGAGTTTTCTTCACACTCTTCAAGGAACCAAAAAATCAAACCCTTCATTCATGGAGACACAAAACCTTATCTTTTTAATCCTTCTCTTCTTTCAACCTTGTTCACTTTCCTTTGTTCCTATAGACAACTACTTAATTAACTGTGGATCACACAACAATGCTTCAATCTTCAATAGAGTCTTCATGAGTGATTCAACAAACCCAGGCTTGAATTTTCTCTCTTCAGATGATTCCATTTCTCTCATGAACAAAAACCCATCTCCAAATTTGCAAACTTTGTATCAGACAGCCAGAGTTTTCATCACCACTGGGAGATACAGGTTCAATATTAAGAAAAATGGTACTCATTTGATTCGTTTTCATTTCTTTCCCTTTAAAGATCAGGGTTTTGACTTGAAATCTGCAAAATTTAGTGTTTTTGTTAATGGAATTTCGGTTCTAAGTGAGTTTAAGCCACCTGGTGAGGTTGTGATTAAAGAGTTTATTTTGAAGATTGAGTCAAACTTGCTTGAAATTTTGTTTAGACCCTTTAATTCAGGTTTTGGATTTGTAAATGCTGTGGAAGTTTTTACTGCTCCTGAAGATTTTGTTATAGATTATGGAACAAGGTTGGTTGGTCCTTCTGGTATGGAAGAGTACAGAAACATTTCATCTCAGGTTTTAGAAACTATTCATAGGATTAATGTTGGAGGTGTGAAAGTAACTCCTTTTAATGATACCCTTTGGAGGACTTGGATTCCTGATGAGGATTATTTGGTTTTTAAGGAAGCAGCTAAACATGCAGTAAGCACTCATACACCTGATTACGAGAAGGGAGGCGCGACTCCAGAGATCGCGCCTGAAAATGTTTACATGACTGCTCAACAGATGAATAGAGAAAACACAAGTTTAGCTTCAACGTTTAATATAACATGGAAGTTTCCCGTGGCTTCTGACGGTGTTTCGCACTTGATTCGGTTGCATTTCTGTGATATAGTTAGTACTTCTCTCAATTTGCTTTACTTTGATGTGTATATCAATGGTTACATTGCATATAAGGATTTTGATTTGTCATCGCTTACATTCCACACTCTTGCATCACCGGTGTATGTGGATTTTGTTGCTAATTCGGACGATTCGGGTGTTATTGAAATAAGTGTTGGTCCTTCTGAGCTGAGTAGTTCTATAAGGATTAATGCCATATTGAATGGTGCAGAGATAATGAAGATGGTCAACGATGTCGACAATACTAAGATTGTGCACAGGAGGAAACATTTATGGGGGTTGATAGGTTCGATTGTTGGAGGAATTGTTGTCTTGTTTTTGGTTGTAACTGTTTTTCTACTTGCTACCAAATGCAGGAAGAAGAAACCAAAAGAAACTACGGTTGGGAGTGTGGGATGGACGCCTTTGCGTATGTTCGGAGGGAGTTCTCTTAGTAGAACATCCGAACACGCGATACACGATGATAGCGGTGGTAGCGAAGCAGATTACGAAACAACAAGAACAATTCATGAAAACTCTACCAGCAGAAGAATAGAGAGAGATTATGATAATGATTGTTCAGATGTTAGTACTAGCCAAGTGTTTTCCCAGCTCATGAATAATAATGATTCCTCGTGGTTAAGTGGGGCCTATGGAAGAAAATGGAGAAGCCTTTTGCCGCCATAA 1650 0.3806 MSFLHTLQGTKKSNPSFMETQNLIFLILLFFQPCSLSFVPIDNYLINCGSHNNASIFNRVFMSDSTNPGLNFLSSDDSISLMNKNPSPNLQTLYQTARVFITTGRYRFNIKKNGTHLIRFHFFPFKDQGFDLKSAKFSVFVNGISVLSEFKPPGEVVIKEFILKIESNLLEILFRPFNSGFGFVNAVEVFTAPEDFVIDYGTRLVGPSGMEEYRNISSQVLETIHRINVGGVKVTPFNDTLWRTWIPDEDYLVFKEAAKHAVSTHTPDYEKGGATPEIAPENVYMTAQQMNRENTSLASTFNITWKFPVASDGVSHLIRLHFCDIVSTSLNLLYFDVYINGYIAYKDFDLSSLTFHTLASPVYVDFVANSDDSGVIEISVGPSELSSSIRINAILNGAEIMKMVNDVDNTKIVHRRKHLWGLIGSIVGGIVVLFLVVTVFLLATKCRKKKPKETTVGSVGWTPLRMFGGSSLSRTSEHAIHDDSGGSEADYETTRTIHENSTSRRIERDYDNDCSDVSTSQVFSQLMNNNDSSWLSGAYGRKWRSLLPP* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4482 549 Pfam Malectin-like domain 46 403 IPR024788 -
Psa6g4482 549 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 31 466 - -
Psa6g4482 549 MobiDBLite consensus disorder prediction 476 505 - -
Psa6g4482 549 Gene3D - 43 193 - -
Psa6g4482 549 Gene3D - 220 405 - -
Psa6g4482 549 PANTHER OS07G0166700 PROTEIN 31 466 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4482 Psa-Chr6 392322764 392326071 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4482 23 466 Glycosyltransferase AT4G00300 38.298 3.14e-96 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4482 - - lja:Lj2g3v1902230.1 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4482 6 392322764 392326071 Psa6g4482 6 392322764 392326071 ECH