Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4481 ATGGCGAAAGTGACACTTCACGTGTACGACTTGACCAATGGTTCGGAGAAGACGAACAACACCGTTGTTCACATCAACAAGATCTTCAAGAACGGTATTGGTCTCGGTGGAATATTCCACAGCGCTGTTCAGGTTTATGGAGATGAAGAATGGTCATTTGGATTCTGTGAAGAAGGAACTGGAGTTTTTAGTGGTCCTTCAGGGAAGAACACAATGTTTACATATAGAAAATCCCTTGTTCTAGGAAAAACAAACTACAATATTTTCAAGGTAAATCAAATATTAAGAGAACTTAGTAGAGAGTGGCCTGGAAATTCTTATGATCTCTTCTCCAAAAACTGCAACCACTTCTGTGATGAATTTTGTCGAAGACTAGGCGTTCCAAAACCTCCAGGTTGGGTTAACAGGTTTGCGAACGTTGGTGATATTGTTAAGGAAGTGGCTAGGAATGCAGCATCGCTGTTCCGGCATGCAAAAACAGAGATTGTATCAGCAAGCAAAACAGCATACAGATTCCTGCTGTGTGTTACAAATAATGTTAAAGCTGATATGTATGATTCCCCTAGAGAAGAAGAATCTCCTAGAGTTCAACATGCTTGGTTGAAAAAGCTTATTACTAACGGTGTGAAACCATCTACTTCTAGTAGTTCAGAAGCTGAGAATCCATGTGACTGA 675 0.403 MAKVTLHVYDLTNGSEKTNNTVVHINKIFKNGIGLGGIFHSAVQVYGDEEWSFGFCEEGTGVFSGPSGKNTMFTYRKSLVLGKTNYNIFKVNQILRELSREWPGNSYDLFSKNCNHFCDEFCRRLGVPKPPGWVNRFANVGDIVKEVARNAASLFRHAKTEIVSASKTAYRFLLCVTNNVKADMYDSPREEESPRVQHAWLKKLITNGVKPSTSSSSEAENPCD* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4481 224 ProSiteProfiles PPPDE domain profile. 2 144 IPR008580 GO:0008233
Psa6g4481 224 PANTHER DESUMOYLATING ISOPEPTIDASE 1 220 IPR008580 GO:0008233
Psa6g4481 224 PANTHER EXPRESSED PROTEIN 1 220 - -
Psa6g4481 224 Gene3D PPPDE domains 1 167 IPR042266 -
Psa6g4481 224 Pfam PPPDE putative peptidase domain 3 149 IPR008580 GO:0008233
Psa6g4481 224 SMART DUF862_2a 2 156 IPR008580 GO:0008233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4481 - - gmx:100786944 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4481 6 392319777 392321628 Psa6g4481 6 392319777 392321628 ECH