Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4472 ATGAATAAAATAGTGCTGCAAGTGGAAATACATGATGACAAGACAAAGAAAAAAGCCATGAAGGCGATCTCTAATATTTCAGGAGTTGAGTCAGTGTCTTTAGATATGAAGGACCAGAAATTAACCTTAACTGGAGACATAGATCCTGTGCAAGTAGTGACAAAGTTGAGGAAGCTGTGTCTTCCTAAAATATTGTCTGTTGGACCAGCCAAGGAGCCTAAGAAAGAAGAGAAAAAGAAGGTTACAGAGGAGAAAAAGGATCAAAGTAAGAACTCAGCAGCACATGGGGTTGTGAAGGTTTGTGAAGCCTATCATTATCCTATGATGATGGCACAACCACAATACTATTACACTAGTGTGGAAGAGAATCCTAATGCATGTGTTATCTGTTAA 393 0.3868 MNKIVLQVEIHDDKTKKKAMKAISNISGVESVSLDMKDQKLTLTGDIDPVQVVTKLRKLCLPKILSVGPAKEPKKEEKKKVTEEKKDQSKNSAAHGVVKVCEAYHYPMMMAQPQYYYTSVEENPNACVIC* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4472 130 MobiDBLite consensus disorder prediction 69 93 - -
Psa6g4472 130 SUPERFAMILY HMA, heavy metal-associated domain 4 60 IPR036163 GO:0046872
Psa6g4472 130 MobiDBLite consensus disorder prediction 69 92 - -
Psa6g4472 130 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 130 - -
Psa6g4472 130 Gene3D - 1 72 - -
Psa6g4472 130 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 130 - -
Psa6g4472 130 Pfam Heavy-metal-associated domain 6 58 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4472 Psa-Chr6 392014581 392015935 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4472 - - cam:101510144 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4472 6 392014581 392015935 Psa6g4472 6 392014581 392015935 ECH