Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4456 ATGGCAGGGGAAACAGAATCCTTCACCGATAAGATAGAAGAGAAATTTCATGACCACAACTCCGATTCAGATTCATATTCCGATTCCGATGACGACAGTAAGAAGAAGCCATCGGCATTTGCCTCTAAAGTCAAGAATGTTTACCGTCTTTTCGGTCGCGATCGTCCCGTTCACAAGGTCTTAGGCGGTGGTAAACCTGCGGACATTTTACTATGGAGGAACAAGAGATGCACGGGAATGGCACTCGGTGCTGGCACTGCATTGTGGGTTTTCTTTGAGTTGATGCAATACCACCTCATAACTCTTGCTTGCCATTTAATGATTTTGTCTCTTGCCGCCCTTTTCTTGTGGTCTAATGCATCTGTCTTTATCCACAAGTCTCCACTGCAAATCCCACATATTCAAATTCCTCAGGAATGCGTTCTTGAGGTTGCTTCTGTTCTGAGAGTTGAAATTAACCAAATGCTCACTGTTTTGCGGGATATTGGAACTGGGAGAGATATTAAGCAGTTTCTTACTGTTGTTGCTGGATTGTGGGTTATCTCAGTTATAGGCAGCTGGTTCAATTTCTTGACATTGTTTTATTTATTCTATTTATCACTGTTCACATTGCCACTGGTGTATGAGAAACATGAAGACCAGGTTGATGCACTGGCTGAGAAAGCAATGATTGAGATCAAGAAACAGTATGCAGTGCTTGATGCTAAGGTTTTGAGCCAGATACCAATTGCAGGGTTCAAAAAGGATTAG 750 0.4253 MAGETESFTDKIEEKFHDHNSDSDSYSDSDDDSKKKPSAFASKVKNVYRLFGRDRPVHKVLGGGKPADILLWRNKRCTGMALGAGTALWVFFELMQYHLITLACHLMILSLAALFLWSNASVFIHKSPLQIPHIQIPQECVLEVASVLRVEINQMLTVLRDIGTGRDIKQFLTVVAGLWVISVIGSWFNFLTLFYLFYLSLFTLPLVYEKHEDQVDALAEKAMIEIKKQYAVLDAKVLSQIPIAGFKKD* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4456 249 PANTHER RETICULON-LIKE PROTEIN 2 247 - -
Psa6g4456 249 Pfam Reticulon 67 222 IPR003388 -
Psa6g4456 249 MobiDBLite consensus disorder prediction 7 37 - -
Psa6g4456 249 PANTHER RETICULON 2 247 IPR045064 GO:0009617
Psa6g4456 249 MobiDBLite consensus disorder prediction 1 37 - -
Psa6g4456 249 ProSiteProfiles Reticulon domain profile. 66 249 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4456 Psa-Chr6 391153721 391156200 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4456 - K20721 gmx:100790190 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g3668 4 308525805 308528607 Psa6g4456 6 391153721 391156200 ECH
Psa7g0660 7 44662271 44669390 Psa6g4456 6 391153721 391156200 ECH
Psa6g4456 6 391153721 391156200 Psa6g4456 6 391153721 391156200 ECH