Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4441 ATGGCATCCTTAAAACCACTTTCAATCCTATTGTTCCCTCTTTTCCTAGTTTCCCTATTCAAATATTCTCATGCTGCTGGAATTGCAGTCTATTGGGGCCAAAATGGAGGTGAAGGTTCCTTGGCAGATGCTTGCAACACAAACAACTACCAATTTGTAAACATAGCTTTTCTGTCCACTTTCGGCAATGGCCAAACCCCGCAACTAAACCTTGCTGGCCATTGTAATCCAAGTGCCAATGAATGCACAAAGTTTAGTTCCGAGATTCAAGCATGTCAAGCGAAAGGAATCAAAGTTCTTCTCTCTCTCGGAGGCGGCGCCGGAAGCTACTCTCTTAGCTCCGCTGATGATGCTACACAAGTTGCAAACTATCTATGGAACAATTTCTTGGGTGGCACGTCAACTTCAAGGCCATTAGGTGACGCTGTTTTGGATGGAATTGATTTTGATATTGAAGCTGGTGGTGAACATTTTGATGAACTTGCAAGAGCACTAAATGGTTTTAGTGCACAAAAGAGAGTTTACTTGTCTGCAGCACCACAGTGTCCTTTCCCTGATGCTCATTTGGATTCAGCTATTAACACTGGTTTGTTTGATTATGTTTGGGTTCAGTTTTACAATAATCCTCAGTGTCAATACTCGAATGGAAACACTAACAATCTTGTTAATGCTTGGACTCAATGGACTTCAAGTCAAGCTAAACAAGTGTTCTTAGGTGTTCCTGCTAATGCTGCTGCTGCTCCAAGTGGTGGCTTTATTCCTTCTGATGTTTTGATTTCTCAAGTTCTTCCTGCTATTAAGAGTTCTCCTAAATATGGTGGAGTTATGATTTGGGATAGATTCAATGATGGACAAAGTGGATACAGTAATGCTATTAAGGGCAGTGTTTAA 891 0.413 MASLKPLSILLFPLFLVSLFKYSHAAGIAVYWGQNGGEGSLADACNTNNYQFVNIAFLSTFGNGQTPQLNLAGHCNPSANECTKFSSEIQACQAKGIKVLLSLGGGAGSYSLSSADDATQVANYLWNNFLGGTSTSRPLGDAVLDGIDFDIEAGGEHFDELARALNGFSAQKRVYLSAAPQCPFPDAHLDSAINTGLFDYVWVQFYNNPQCQYSNGNTNNLVNAWTQWTSSQAKQVFLGVPANAAAAPSGGFIPSDVLISQVLPAIKSSPKYGGVMIWDRFNDGQSGYSNAIKGSV* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4441 296 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 144 152 IPR001579 GO:0004553|GO:0005975
Psa6g4441 296 CDD GH18_hevamine_XipI_class_III 26 294 IPR045321 -
Psa6g4441 296 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 296 IPR001223 GO:0005975
Psa6g4441 296 PANTHER ACIDIC ENDOCHITINASE 14 296 - -
Psa6g4441 296 Gene3D Glycosidases 26 296 - -
Psa6g4441 296 SUPERFAMILY (Trans)glycosidases 24 292 IPR017853 -
Psa6g4441 296 PANTHER ENDOCHITINASE 14 296 - -
Psa6g4441 296 Pfam Glycosyl hydrolases family 18 28 282 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4441 Psa-Chr6 390551207 390552443 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4441 1 296 Glycoside Hydrolase AT5G24090 58.416 1.88e-126 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4441 K01183 - gmx:100783329 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4441 6 390551207 390552443 Psa6g4441 6 390551207 390552443 ECH