Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4396 ATGCCAGCGACGGACTATCAAAGTTCGTCTCCTTCATCGTTAACGCAGTTTGGTCGTTCAATTCTAAGCTTTCGTCGTGAACAGGTTCATTCAATGGAAGGGTCAACCTTAGAGACTGAACTTGATTCTTTTCAGGAACATGTTGCTGATCGTTTCCTTGATCTATCTTCTGTTGTTCAAGATGATTTGCTTTCATTGAAATGGATTGGGAAGCTTCTGGATTGTTTTCTGGTTTGTCAGGAGGAGTTCAAAGCGATCCTTCATAGCCATAAGGGACAGGCTTCGAAACCGCCGTTGGATCGAATGGTGTCGGATTATTTTGAACGGAGTGTTAAGGCTTTGGATGTTTGTAATGCTATTCGTGATGGGGTTGAACAGATTCGGCTTTGGCAGAAGCTGTTGGAGATTGTTCTTTATGCATTGGATCATGAAAGAAGTATTGGTGAAGGGCAGTTTCGGAGAGCGAAGAAAGCGCTGATTGATTTGTCTATTAGTATGCTTGATGATAATAAGGATTCTAATGGTTCTGTTGCGCAGAGAAATCGATCTTTCGGGCGGAACAATGGTGGTAGAGATAAAGATCACAGCCATGGGAATAGTCATGGGAATAACAACTATCAACATCGGTCTTTGGGGCATTTTAGATCACTTTCATGGAGTGTTTCTCGTACTTGGTCTGCTGCTAGACAACTCCAAGCGATTGGGAATAACATTAATCCTCCGAAAGCGAATGATCTTATTGCGACAAATGGTCTTGCAATGTCAGTGTATGTTATGAATTCGGTCTTGTTGTTTGTTATGTGGGCTCTTGTGGCTGCAATTCCTTGTCAAGACCGTGGATTGCACGTGCATTTCACCATTCCAAGGAGCTACACTTGGGCTATTCCGTTGCTCGCGCTGCACGATAGGATCTTGGAGGAGTCGAAGAAGCGCGAAAGGAAGAATGCTTGTGGCTTGCTTAGAGAGATTCAGCAGATTGAGAAATGTGTTAGACAGATGAGTGAATTGGCTGATTCTGCGCAGTTTCCGTTAACGGAGGAGAAGGAAGTGGAAGTTAGGCAGAGAGTTCAAGAGGTGTCAAAGGTTTGTGATGCTTTGAAAGATGGTCTCAACCCATTGGAGCGCCAAGTGAGGGAAGTTTTCCATAGAATTGTGCGGAGCCGAACCGAAGGGCTTGACTCTTTTGGTAGTAGGCCAAACAATGCTGAGTAA 1212 0.4422 MPATDYQSSSPSSLTQFGRSILSFRREQVHSMEGSTLETELDSFQEHVADRFLDLSSVVQDDLLSLKWIGKLLDCFLVCQEEFKAILHSHKGQASKPPLDRMVSDYFERSVKALDVCNAIRDGVEQIRLWQKLLEIVLYALDHERSIGEGQFRRAKKALIDLSISMLDDNKDSNGSVAQRNRSFGRNNGGRDKDHSHGNSHGNNNYQHRSLGHFRSLSWSVSRTWSAARQLQAIGNNINPPKANDLIATNGLAMSVYVMNSVLLFVMWALVAAIPCQDRGLHVHFTIPRSYTWAIPLLALHDRILEESKKRERKNACGLLREIQQIEKCVRQMSELADSAQFPLTEEKEVEVRQRVQEVSKVCDALKDGLNPLERQVREVFHRIVRSRTEGLDSFGSRPNNAE* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4396 403 PANTHER OS04G0688000 PROTEIN 1 398 - -
Psa6g4396 403 MobiDBLite consensus disorder prediction 171 185 - -
Psa6g4396 403 PANTHER BPS1-LIKE PROTEIN 1 398 - -
Psa6g4396 403 MobiDBLite consensus disorder prediction 171 202 - -
Psa6g4396 403 Pfam Protein ROH1-like 15 394 IPR008511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4396 Psa-Chr6 385053220 385058519 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4396 - - gmx:100818059 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4396 6 385053220 385058519 Psa6g4396 6 385053220 385058519 ECH