Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4395 ATGGAAGTTGAATTGGGTCTCAAGATCACAAGAACAAAAGATGACAGCACTTCCATTTCAGATTTTCAGTTTGCCAAAGATAGAGCAGGTCCTGTCTTCTTATCTAAAGAAACTGATTCAACTCTCACCCTCACAGCACATCTCAAAGGTTATAAGAAAGAGAACATCGACATCAACATTAACAAAGATGGTACAAAGATTTCAGTGAGTGGTGAAAAAGAGGTGCAAGAAATGCAAATGATGCCATTCAAGAAAGAGGTGAAAACAAAAGGGTTTAGAAAGAAGTTCAAAATCCCTAATGGAGTTATTTTGGATAAGATCAAGGCTAAGTATAACGAAGATGAAGGACGGTTGACTATAGTGATGCCAAAAATTGCAAAAGGTGAATTGTGTGGGGTGGGAATAGAAGAAGTGAAGGAAGAAGAGGGTGCAAATAGTATTGTATCAGAACCAGAACAAATTGTAGCAGAAGAAGAAAAGATTTTAGATAATAAGAGTGAAGAGGAAAATGCTCCTGTGAAGAAGAGACGTTCTAAAAAGCCATGGCATCCTTGTCCTCCATTGGTTTTTGGAGGATCAACTTTGCTTGCATCTATTATTTTTCTTGTATTGCACTATATGAGAGTGAGAAAGAGTTGA 639 0.3725 MEVELGLKITRTKDDSTSISDFQFAKDRAGPVFLSKETDSTLTLTAHLKGYKKENIDININKDGTKISVSGEKEVQEMQMMPFKKEVKTKGFRKKFKIPNGVILDKIKAKYNEDEGRLTIVMPKIAKGELCGVGIEEVKEEEGANSIVSEPEQIVAEEEKILDNKSEEENAPVKKRRSKKPWHPCPPLVFGGSTLLASIIFLVLHYMRVRKS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4395 212 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 1 174 - -
Psa6g4395 212 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 155 210 - -
Psa6g4395 212 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 141 IPR002068 -
Psa6g4395 212 PANTHER HEAT SHOCK PROTEIN 26 1 174 IPR045045 -
Psa6g4395 212 PANTHER HEAT SHOCK PROTEIN 26 155 210 IPR045045 -
Psa6g4395 212 SUPERFAMILY HSP20-like chaperones 35 127 IPR008978 -
Psa6g4395 212 Pfam Hsp20/alpha crystallin family 36 127 IPR002068 -
Psa6g4395 212 Gene3D - 9 131 IPR008978 -
Psa6g4395 212 CDD ACD_sHsps-like 36 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4395 Psa-Chr6 385003670 385004844 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4395 - - aprc:113873754 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4395 6 385003670 385004844 Psa6g4395 6 385003670 385004844 ECH