Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4380 ATGAATTCTTCAACATTCTGTTCCGTGTTCCTTGGCTTGATCCTAATTTCTCAATACCCTTTCGCTGCAAATGCCAGATCTCATGGATTAAAGGGAAGCCTAATTACCATCGTTTGCGGCGCATCATCCAACGTGGCAGAATGCAACAAAATCCTCGGATCAAATCCTCATGCCGCAGAAATGAAAAGCTACAGGGAACTCGCAAAGGTTGTTCTCGAAATGGCATTAGAGAAAGCATCCGCAGGACAGAGTTTTCTGAAAGGATTAGCAGCAGAAACCAAGTCTCCAGCACTCACACAGTGTGCTAATTTTGATTATGATGGTGCTGTTATGTCTTTTAAAAGCGCTATTGGTGAGTTGAAGAAAGATCCTCAAACTGCTAATTATGATGCTAAGGTTGCTGGTGATGGACCTGCTCAATGTGACAGAGGAATGGCGGCTGGACATGTTGTTAATCCTGAAGTTACCGCTCTTAATAGTCTGATTACTTTTTTTAGTGAATTGGCATTCCTTGTCACTAATTATCTTTAA 531 0.4181 MNSSTFCSVFLGLILISQYPFAANARSHGLKGSLITIVCGASSNVAECNKILGSNPHAAEMKSYRELAKVVLEMALEKASAGQSFLKGLAAETKSPALTQCANFDYDGAVMSFKSAIGELKKDPQTANYDAKVAGDGPAQCDRGMAAGHVVNPEVTALNSLITFFSELAFLVTNYL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4380 176 CDD PMEI-Pla_a_1_like 38 174 IPR034088 -
Psa6g4380 176 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 176 - -
Psa6g4380 176 Pfam Plant invertase/pectin methylesterase inhibitor 34 160 IPR006501 GO:0004857
Psa6g4380 176 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 176 IPR035513 -
Psa6g4380 176 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 176 - -
Psa6g4380 176 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 175 IPR006501 GO:0004857
Psa6g4380 176 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 176 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4380 Psa-Chr6 384367775 384368754 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4380 - - mtr:MTR_1g098430 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4380 6 384367775 384368754 Psa6g4380 6 384367775 384368754 ECH