Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4372 ATGAATTCTTCATGTTCCGTGTTCCTTGGCTTGATCCTAATTTCTCAATACCCTTTCGCTGCAAATGCCAGATCTCATGGATTAAAGGGAAGCCTAATTACCATCGTTTGCGGCGCATCATCCAACGTGGCAGAATGCAACAAAATCCTCGGATCAAATCCTCATGCCGCAGAAATGAAAAGCTACAGGGAACTCGCAAAGGTTGTTCTCGAAATGGCATTAGAGAAAGCATCCGCAGGACAGAGTTTTCTGAAAGGATTAGCAGCAGAAACCAAGTCTCCAGCACTCACACAGTGTGCTAATTTTGATTATGATGGTGCTGTTATGTCTTTTAAAAGCGCTATTGGTGAGTTGAAGAAAGATCCTCAAACTGCTAATTATGATGCTAAGGTTGCTGGTGATGGACCTGCTCAATGTGACAGAGGAATGGCGGCTGGACATGTTGTTAATCCTGAAGTTACCGCTCTTAATAGTCTGATTACTTTTTTTAGTGAATTGGCATTCCTTGTCACTAATTATCTTTAA 525 0.419 MNSSCSVFLGLILISQYPFAANARSHGLKGSLITIVCGASSNVAECNKILGSNPHAAEMKSYRELAKVVLEMALEKASAGQSFLKGLAAETKSPALTQCANFDYDGAVMSFKSAIGELKKDPQTANYDAKVAGDGPAQCDRGMAAGHVVNPEVTALNSLITFFSELAFLVTNYL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4372 174 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 173 IPR006501 GO:0004857
Psa6g4372 174 CDD PMEI-Pla_a_1_like 36 172 IPR034088 -
Psa6g4372 174 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 174 - -
Psa6g4372 174 Pfam Plant invertase/pectin methylesterase inhibitor 32 158 IPR006501 GO:0004857
Psa6g4372 174 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 174 IPR035513 -
Psa6g4372 174 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 174 - -
Psa6g4372 174 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 174 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4372 Psa-Chr6 383601850 383602374 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4372 - - mtr:MTR_1g098430 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4372 6 383601850 383602374 Psa6g4372 6 383601850 383602374 ECH