Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4301 ATGTGTAGTATGTGCCATTATTGCGGTGCAAGCTTGACGGAATCAAATGCTGACAATAAGAAACATGGAAATCAGATTAGTTTAAAGTTGAATGGGAAAGTCCCCTTAAAACATTGTAAATCTTGTGGAGGGAAGCTAGATCGAGAAAGTGTGAAATGTCATAGTACGAGTCCATTTGCGACACCGTATATCAGTCCAACTACATCAATGTCAAGTACTGACAGCTGTGTGTCCACTTCCAGCGAATTTTCAGTTGATGCGAACTCATTTGACAGGAATAGCCAAGAAGATAGTGTAGTCGAAGGTGTTATGGAAAATCTTGATCATAAGTTCAACCTGAAATCAGGGAATATGATGGAAAACGATACTCCAAGACTTGGGATACAGGAGATCGATGACTATACTATGAGAGACGTGGAGATTACAGACGGAGATAGCTTTCAAGACGCTAAAGCCGACGAAAATGAATATTCTTTTCCCGATAATTTGGATAATCAAACTTGGGAACCACCTGAGCCAGAAAACCCTCAAGATGAAATGGACAATAGTGTGGCTTGTAATGACGATGATGAAGAACAGGGCATCGAGATTGCAAACTTGGGCGAACGAACATCTATGAGTAGTTCTAAGGATGAATTATGCAGGGGCTATAAGTTTAGAGCGGAAAGAGAAAAAGAATTGGTAAAAGTAATGAATGGGAAATTTAAGGCCCTTGTAGGCCAGCTTCTTAAATCTGTTGGAGTTTCCTCTTCCGATGAAGGTGATAAGAGTTGGGTAGACATAGTTACACATTTGTCTTGGGAAGCTGCTGCGTTTTTGAAGCCTGATGGTATTGGAGGTAATGCAATGGATCCTGATGGGTTTGTTAAAGTGAAATGCATTGCAGCTGGTTCTCGCAGCCAAAGTCAACTATTCAAAGGTTCGGTCTTTAAGAAACATGCCGCTCACAAGCATATGCCAACTAAGTACAAAAATCCAAGGTTGCTACTCATTAGGGGCATGCTTGGCCATGCTATGAATGAGCTGTCCTCATTTAAATCCATGGCTCAGGAGAAAGGCTATCTGAAATCTAAAATGGATCTTATAAATATATGCCATCCAAATGTTATATTAGTGGAGAAAACAGTTTCTCGTGATATACAAGAGGCAATTCTGGATAAGGGGATGACACTAGTACTTGATATGAAGATTCATCGACTGGAAAAAGTTGCACGCTGCACTGCTTCACCAATTATGTCATGTGATGATTTGGACAGCCAAAAACTAAGAAAGTGTGATTCTATTTATTTTGAGAGATTTGTGGAGGAACATGATGCTAATGGTGAAGGAGGAAAGAAGCCCACCAAGACCTTGATGTTCATTGAAGGATGTCCTACACGTTTGGGCTGTACGATTTTGTTGAAAGGAACACACAGTGATGAGCTAAAGAGAATCAAATGTGTTGTGCGGTGTGCAGTTATCATGGCATATAACTTAATCCTGGAAACCTCCTTTCTTGTTGATCAGAAAGCAATGTTCTCTACCTTTCCTCCAGTTACTGTGGCAGATATTTTGCCAATTAATCAAGAATCCAGCGATTCATCATCTATTAATTCAAGTGTTCCACCGACTCTTGAGCATTCAGATGAAAATGGAGTAGTTAGTACTGATATTCCCATATACAATGGACTTCATGAAAAAAGCAACAATGGTTTAACTGTAGAATCTGAAGAATTATCCCCATTTTCTTATGAACCATATAATCCAGCCATCTTTACTGGATTCTCAGCGATTTCAACTTCTCTGAAGAAGGTAATGGGGGATAGTTTTCCCTTTGCATCTGCTGCTTCTTACCAGTCTTTATCAGCATACCTTGGCTTCAATGGAAGGAGACCCGATGGCCAGGTTAACACTTCTGTTTCTATTGAAGAGTTTCCCGAGGCAGATGAAAATACCAGGATTGAAGAAAATAATGATTCCAATGAAATAAATTTACTTAATGATGAACAATCCCCGTCCTCACCTTTGCACTTAGATTCCAATGGTGATATAAGTAAAGTTGATAGTGATAAAAAAAAACTCCAAAGTAAAGATGATATCAATGCAGTGTTAGATTCTCAGAGTATTTTGGTCTTGATGTCTAGCCGTAATGCTTCAAAAGGAACCGTATGCCAGCAAAGTCATTTTTCCCATATTATGTTCTACAAGAATTTTGACATCCCACTTGGAAAGTTTTTGCAGGATAACCTACTCAATCAGACAAGACATTGTGACACCTGTCAAGAATTGCCAGAAGCGCACCTTTATTATTATGCACATCACAATAAACAGCTCACTATACTAGTGAAACAATTGGCAACAGGAGATTTTTTACCTGGGGAGGAAGAGGGGAAAATTTGGATGTGGAGCCGCTGTGGTAAATGCAAGTCTTGCTCTACAAAGAGAGTGTTGATATCCACCACTGCCCGCAGTTTATCATTTGGAAAATTTTTGGACCTTAGCCTTTCTCATTATTCATCTAGCAGCAAATTGAGCTGTGGCCACTCTCTTGATAGGGATTTTCTTCACTTCTTTGGACTAGGTTACATGGTTGCAATGTTCAGATATTCTTCAGTTGCTACTTATACTGTGTCTATGCCTCCTCACAAGCTAAAATTTGGTGGTGCTATAAAACAAGAGTGGCTTATGGAAGAGACCGATAAAGTGCACATGAAAGGCATAAGACTGTTCACAGAAATTGCAAACTGTTTGAAGACAGTAAACTTTGATGGATCAAATCCTAACCGAGGATCAAAAAGAGAGTTCTCCGAGGTTGAGAAGATGTTAAAGAATGAACGAGAAGAGTTTGAGGTTTACATCAAGATGGTGGTTGCTAAGAAAGTTGATCCAGATCAGGCTACCTTCAATCTTCTCAGTCTTAACCGATTGATGTGGGATCTTCTTATTGAATCCGTTGTGTGGGGTCAACGCTTGAAATCACTACGCTCACCTGAGAAAGTTGTGCAAGAGTACAGCTATTCGAAGGTGGAAGGTATTGCTGGTAGAGAAGTTGCATCTAGAGGTAATTTTAGGGAAGATGGCAATGTGAATGGGGACACCCATGTGAAATTTATGTCAGAAACATCTGTGAAAGTAAATGAAATCTCAATAAAGGAAATCCCTATCAGTGGATCTCCTCTAGAGTGCAATGAACAGGGTGATCCATCTAAAACTTTTGATATCCCACAGAATGTGAAAATACAAACTGTTGACGGTTTGGGATCAAAGGGATATTCTGACCCCAAGTTGGAATCGAGTTCAAATGTTTTCACTCAGTTTCCTTCAGCAAATGGCCATATTCAAGTACATCAAAACTTTCCAGTTGCTATAAATATTCAACCTAGTCGTCCAATTGCTGATTCAAAGGTGTTAAACCAGAGTGCTTCACTGTATTCACCTGTTTCCAAATTGCAAGATTCGGATGAATGGTTCTGGAAGCCATTTTCTGATATTCGGCAGATAGGCATAAGGGAATTTCAGAGAAGCTTCTTTCCAAAATTTGAATATCTTTGCAGCTCTATCTCAGAACATGTGCCCACAGCCAATCAATTCACCACTGAGGAAGGTCCAAGGTTGCACATTCCTCTCAAGACAGATAATCATGTCGTGTCTGACTTTGAGGGTGAACCCTCAAGCATAATTGCTTGTGCACTGTCCTTGTTGAAAGACTCATCTGAGGTGACAGAAATTGATGAAGGTGATGTGAAAGAAGGTGGGATAACTTCAAAATCTACAGATTCTTTGCACGACTCTCTAGATTCAGATTCTGTGCATTCTACTGGAAGCATGTCTTCAGAAGAGTCAAGATCATTTCGTGCCACAGGAAACCATAGCAAAGAAGTTCATCTGGGTTATGCAAAATCACTTGGGAGGGAAAAATATTCTGTGGTTTGTCATTATTATAAGCAGTTCCGTGCACTTAGAAGTTGTTGTTGCTCATCTGAGATTGATTATATTGCTTCTTTAAGCCGTTGTATGAATTGGGATGCCAAAGGTGGAAAAAGCAAGTCTTTTTTCGCAAAAACACTTGATGAGAGGTTCATCATAAAGGAAATCAAGAAGACGGAACTTGAAGCATTTTTGGGATTCTCTTCTCTATATTTCAAACACATGAGAGAGTCATTTGAGTCTGGTAGCCAAACATGTCTAGCAAAAGTCTTGGGGATATATCAGGTTACTAGAAGACACATTAAAAGTGGAAAAGAGGTTAAACATGACCTCATGGTGATGGAAAATCTTGCCTACAATCGAAATATTGTACGCCAGTATGATCTTAAAGGTGCTCTTTTTGAGCGGTATACTTCTGATGCTGCTGGTGCTGAGGATGTTCTTTTGGATCAGAACTTTGTGGAAGACATGAACTCTTCCCCATTATATGTCAGTCATAAAGCAAAGCGAGTTCTTCAGCGTGCTATTTGGAATGACACATCTTTTCTCAATTCAATCAATGTGATGGATTACTCCTTACTTGTTGGAGTTGATTCTCAGAAGCGCGAGCTTGTTTGCGGAATCATTGATTATCTCAGGCAGTATACCTGGGACAAGCATCTGGAGACATGGATGAAGTCTTCACTTGTAGTGCCCAAGAATCACATGCCAACTGTAATTTCTCCAAAGGAGTACAAGAAGCGGTTTAGAAAGTTTATGTCTACATATTTTTTTAGTGTACCAGATCATTGGTGCTCTCAAAAGTTCCCTGTTCCTTGCAAACTTTGTTGCTCAGGAAAAGATGACCCTTCCCAAATGGTTTCTCTTCCTAAATCTTTTTAA 4788 0.3968 MCSMCHYCGASLTESNADNKKHGNQISLKLNGKVPLKHCKSCGGKLDRESVKCHSTSPFATPYISPTTSMSSTDSCVSTSSEFSVDANSFDRNSQEDSVVEGVMENLDHKFNLKSGNMMENDTPRLGIQEIDDYTMRDVEITDGDSFQDAKADENEYSFPDNLDNQTWEPPEPENPQDEMDNSVACNDDDEEQGIEIANLGERTSMSSSKDELCRGYKFRAEREKELVKVMNGKFKALVGQLLKSVGVSSSDEGDKSWVDIVTHLSWEAAAFLKPDGIGGNAMDPDGFVKVKCIAAGSRSQSQLFKGSVFKKHAAHKHMPTKYKNPRLLLIRGMLGHAMNELSSFKSMAQEKGYLKSKMDLINICHPNVILVEKTVSRDIQEAILDKGMTLVLDMKIHRLEKVARCTASPIMSCDDLDSQKLRKCDSIYFERFVEEHDANGEGGKKPTKTLMFIEGCPTRLGCTILLKGTHSDELKRIKCVVRCAVIMAYNLILETSFLVDQKAMFSTFPPVTVADILPINQESSDSSSINSSVPPTLEHSDENGVVSTDIPIYNGLHEKSNNGLTVESEELSPFSYEPYNPAIFTGFSAISTSLKKVMGDSFPFASAASYQSLSAYLGFNGRRPDGQVNTSVSIEEFPEADENTRIEENNDSNEINLLNDEQSPSSPLHLDSNGDISKVDSDKKKLQSKDDINAVLDSQSILVLMSSRNASKGTVCQQSHFSHIMFYKNFDIPLGKFLQDNLLNQTRHCDTCQELPEAHLYYYAHHNKQLTILVKQLATGDFLPGEEEGKIWMWSRCGKCKSCSTKRVLISTTARSLSFGKFLDLSLSHYSSSSKLSCGHSLDRDFLHFFGLGYMVAMFRYSSVATYTVSMPPHKLKFGGAIKQEWLMEETDKVHMKGIRLFTEIANCLKTVNFDGSNPNRGSKREFSEVEKMLKNEREEFEVYIKMVVAKKVDPDQATFNLLSLNRLMWDLLIESVVWGQRLKSLRSPEKVVQEYSYSKVEGIAGREVASRGNFREDGNVNGDTHVKFMSETSVKVNEISIKEIPISGSPLECNEQGDPSKTFDIPQNVKIQTVDGLGSKGYSDPKLESSSNVFTQFPSANGHIQVHQNFPVAINIQPSRPIADSKVLNQSASLYSPVSKLQDSDEWFWKPFSDIRQIGIREFQRSFFPKFEYLCSSISEHVPTANQFTTEEGPRLHIPLKTDNHVVSDFEGEPSSIIACALSLLKDSSEVTEIDEGDVKEGGITSKSTDSLHDSLDSDSVHSTGSMSSEESRSFRATGNHSKEVHLGYAKSLGREKYSVVCHYYKQFRALRSCCCSSEIDYIASLSRCMNWDAKGGKSKSFFAKTLDERFIIKEIKKTELEAFLGFSSLYFKHMRESFESGSQTCLAKVLGIYQVTRRHIKSGKEVKHDLMVMENLAYNRNIVRQYDLKGALFERYTSDAAGAEDVLLDQNFVEDMNSSPLYVSHKAKRVLQRAIWNDTSFLNSINVMDYSLLVGVDSQKRELVCGIIDYLRQYTWDKHLETWMKSSLVVPKNHMPTVISPKEYKKRFRKFMSTYFFSVPDHWCSQKFPVPCKLCCSGKDDPSQMVSLPKSF* 1596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4301 1595 MobiDBLite consensus disorder prediction 1260 1277 - -
Psa6g4301 1595 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1337 1503 IPR002498 GO:0016307|GO:0046488
Psa6g4301 1595 SMART PIPK_2 1273 1560 IPR002498 GO:0016307|GO:0046488
Psa6g4301 1595 CDD PIPKc_PIKfyve 1299 1559 IPR044769 GO:0000285
Psa6g4301 1595 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1238 1559 IPR002498 GO:0016307|GO:0046488
Psa6g4301 1595 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED 156 1586 - -
Psa6g4301 1595 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 156 1586 - -
Psa6g4301 1595 MobiDBLite consensus disorder prediction 663 685 - -
Psa6g4301 1595 CDD Fab1_TCP 236 502 - -
Psa6g4301 1595 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1246 1418 IPR027484 -
Psa6g4301 1595 MobiDBLite consensus disorder prediction 1237 1281 - -
Psa6g4301 1595 Gene3D GroEL 300 469 IPR027409 -
Psa6g4301 1595 Gene3D - 1419 1560 - -
Psa6g4301 1595 Pfam TCP-1/cpn60 chaperonin family 239 498 IPR002423 GO:0005524
Psa6g4301 1595 Coils Coil 921 941 - -
Psa6g4301 1595 SUPERFAMILY GroEL apical domain-like 301 469 IPR027409 -
Psa6g4301 1595 SUPERFAMILY SAICAR synthase-like 1297 1560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4301 Psa-Chr6 380957675 380968930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4301 319 1569 Acyl Lipid Metabolism Gene Families AT1G34260 47.393 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4301 K00921 - gmx:100809696 2262.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4301 6 380957675 380968930 Psa6g4301 6 380957675 380968930 ECH