Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4214 ATGGTGTCTGCTAATGACCCAGTTGAGTCTTTCTTCAATTCCATTCAAGTTATGAAGGAATCGCTGTCGCCACTTGAAGTGGGTTTTCGAAAGGCGGCCAAGGATTTTGAGCATTGTTTTGCAGGTGCAAAGAACAGTAGGGATGGTGTTTGTTTAATTGCTCAAGTGAGAGATGATGGTGATTTTCAGATCTGTGATGTTAAGAAGAAAAAAGGGTTGTCTATGAAGGTTCCTGTGAAGGCTTTTTTGGGTATGTTTTCACAGAATTCGGGGAATGTAAATAAAACTCATGTTGTTAAGGAAAATGATTCTTCTTGCACCAATTGCTTGCAGTTTTCTGTGACTTGGTCTTTGTTGGTTAATGGGTTTATTCAGTCTTTGCCGATTCCTTTTAAAAATGGGAAGAAGAGGTTGCAGAAAGTGTGTGATGAGGATACTAATAAGGAAAAGTATTCATGCATGAAGCAAACTTTTTCATCATGTGAAGGGAAGCATAATGAGTCTAAGGGTCAATTTGTTAGAACAGTTAAGGAAAAGGTTGTGAAGAGGAAAGATGAAAAACATGTTTCGCTTGAATGTCTTATAGGTTTTATCTTTGATCAGCTATCTCATACACTACAGAGTCTTGAACATGGAATGAATGGAATGCAAGAGAAAAATGAAGTTGGGTGTGGAAAAACTTTGTTGCATTCTGCTCCTTTTGATCATGTGAATGCATTCACTAGCTTCTTGGAAGGGCACAAGGTGAATGTGAATGGTTTCTTAGGGAATTTGAATTTTGCAAAGGTGGGTGGTGTGCCAACAAGTGCAGCTGGAGAAGAAATCACTACACAAAATGAAATGGGAGAGGTCGGTAATGATGAAAATAAGGAAGAAAATGTGGGTATTTTGGCGCAGAAGGTTGCCTCGAACATATTCAGCATTCCTTTAACAAATGTAGAGCGTCTAAAGACTACACTTTCCACGGTTTCGTTGACAGAATTGATTGAACTGCTACCGCAGCTTGGGAAAACATCGAAAGACCATCCTGATAAGAAGAAGCTATTCTCTGTACAAGATTTCTTTAGATACACAGAGTCGGAAGGGAGGAGGTTCTTTGAGGAGTTGGATAGAGATGGTGATGGCCAAGTAACTTTAGAAGATCTAGAAATTGCAGTGAGAAGGAGAAAGCTTCCACGAAGATATGCTAAAGAATTCATGAGCCGTACTAGAAGTCACTTATTTTCTAGGTCTTTTGGCTGGAAGCAATTCTTATCATTCATGGAACAAAAGGAGCCAACAATTCTTCGTGCATACACTTCCTTGTGTTTAACCAAGTCAGGGACATTGAAGAAAAGTGAAATATTGGAGTCACTAAAGAATTCAGGACTGCCTGCAAACGAAGACAATGCTGTTGCGATGATGCGATTTCTAAATGCAGACACAGAGGAATCTATTTCATATGGACATTTCCGCAATTTCATGCTTCTGCTTCCCTCAGATCGTCTTCAAGAGGATCCTAGGAGTATTTGGTTTGAAGCTGCAACTGTAGTTGCTGTTCCACCATCCGTCGAAATTCCTGCTGGAAGTGTTCTAAGATCTGCATTGGCAGGCGGCCTTTCTTGTGCCCTGTCTTGTGCATTATTGCATCCTGTTGATTCAATCAAGACTCGAGTACAAGCATCAACCATGTCCTTCCCTGAAATAATTGCTAAGCTGCCAGAGATTGGGACACGTGGTTTATACAGGGGTTCAATACCTGCAATTCTTGGACAGTTTTCAAGCCACGGCCTGCGAACTGGGATATTTGAAGCAAGTAAGTTGCTGTTGATAAATGTTGCTCCAAACTTACATGAACTCCAGGTACAATCCATAGCATCTTTCTGCAGCACGTTTTTGGGCACAGCTGTGCGAATCCCCTGCGAGGTGTTAAAGCAGAGATTGCAGGCTGGTATTTTCAACAATGTGGGCGAGGCTTTGGTTGGGACTTGGCAGCAAGATGGTCTTAAAGGTTTCTTCCGTGGAACCGGAGCCACACTTTGTCGAGAGGTTCCATTTTATGTTGCTGGCATGGGACTTTACGCCGAATCTAAAAAGGGTGTCCAAAAACTACTAGGACGGGAACTCGAGGCCTGGGAAACAATTGCAGTTGGAGCTTTATCTGGTGGGTTGGCAGCCGTTGTTACAACTCCGTTTGATGTGATGAAAACTAGAATGATGACTGCGCAGGGTCAGTCTTTGTCAATGACCATAGTAGCCATCACTATACTCCGCCACGAGGGACCCCTTGGCTTGTTCAAAGGAGCAGTTCCTAGGTTTTTTTGGATTGCTCCTTTAGGTGCCATGAACTTTGCAGGTTATGAGTTAGCAAGGAAAGCCATGAATAAAAATGAAGAGGCTAAGACTGGAAATTTAGAGTAA 2400 0.42 MVSANDPVESFFNSIQVMKESLSPLEVGFRKAAKDFEHCFAGAKNSRDGVCLIAQVRDDGDFQICDVKKKKGLSMKVPVKAFLGMFSQNSGNVNKTHVVKENDSSCTNCLQFSVTWSLLVNGFIQSLPIPFKNGKKRLQKVCDEDTNKEKYSCMKQTFSSCEGKHNESKGQFVRTVKEKVVKRKDEKHVSLECLIGFIFDQLSHTLQSLEHGMNGMQEKNEVGCGKTLLHSAPFDHVNAFTSFLEGHKVNVNGFLGNLNFAKVGGVPTSAAGEEITTQNEMGEVGNDENKEENVGILAQKVASNIFSIPLTNVERLKTTLSTVSLTELIELLPQLGKTSKDHPDKKKLFSVQDFFRYTESEGRRFFEELDRDGDGQVTLEDLEIAVRRRKLPRRYAKEFMSRTRSHLFSRSFGWKQFLSFMEQKEPTILRAYTSLCLTKSGTLKKSEILESLKNSGLPANEDNAVAMMRFLNADTEESISYGHFRNFMLLLPSDRLQEDPRSIWFEAATVVAVPPSVEIPAGSVLRSALAGGLSCALSCALLHPVDSIKTRVQASTMSFPEIIAKLPEIGTRGLYRGSIPAILGQFSSHGLRTGIFEASKLLLINVAPNLHELQVQSIASFCSTFLGTAVRIPCEVLKQRLQAGIFNNVGEALVGTWQQDGLKGFFRGTGATLCREVPFYVAGMGLYAESKKGVQKLLGRELEAWETIAVGALSGGLAAVVTTPFDVMKTRMMTAQGQSLSMTIVAITILRHEGPLGLFKGAVPRFFWIAPLGAMNFAGYELARKAMNKNEEAKTGNLE* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4214 799 Gene3D Mitochondrial carrier domain 526 798 IPR023395 -
Psa6g4214 799 ProSiteProfiles EF-hand calcium-binding domain profile. 357 392 IPR002048 GO:0005509
Psa6g4214 799 ProSitePatterns EF-hand calcium-binding domain. 370 382 IPR018247 -
Psa6g4214 799 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN-LIKE 120 792 - -
Psa6g4214 799 ProSiteProfiles Solute carrier (Solcar) repeat profile. 611 693 IPR018108 -
Psa6g4214 799 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 120 792 - -
Psa6g4214 799 SUPERFAMILY Mitochondrial carrier 523 781 IPR023395 -
Psa6g4214 799 Gene3D - 439 510 - -
Psa6g4214 799 SUPERFAMILY EF-hand 362 492 IPR011992 -
Psa6g4214 799 Gene3D - 317 429 - -
Psa6g4214 799 ProSiteProfiles Solute carrier (Solcar) repeat profile. 702 786 IPR018108 -
Psa6g4214 799 ProSiteProfiles Solute carrier (Solcar) repeat profile. 522 602 IPR018108 -
Psa6g4214 799 Pfam Mitochondrial carrier protein 615 695 IPR018108 -
Psa6g4214 799 Pfam Mitochondrial carrier protein 523 604 IPR018108 -
Psa6g4214 799 Pfam Mitochondrial carrier protein 702 790 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4214 Psa-Chr6 372462655 372469486 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g4214 1 793 EF-hand Containing Proteins AT2G35800 63.855 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4214 - - gmx:100807842 1259.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4214 6 372462655 372469486 Psa6g4214 6 372462655 372469486 ECH