Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3770 ATGACCAACCTCGCCGTCCCCCTCCTCCTCCTAACGGCGGCGCTAACCCTCTCCGCCGAACCAACCGCCTACGAAGCCCTTCGAAACTTCAATTTTCCAGAGGGAATTCTCCCACAAGGCGTAACACGCTACGAACTCGACGAATCAAGTGGCAATTTCCGCGCCGATCTGAACGGTTCGTGCCGTTTCTCCTTACAAGGTTCGTATCAATTGAGCTACAATTCAACCATCACAGGCCACATAACTGATAACAAACTTACAGATCTCAGGGGTATAAGCGTCAAAGTGCTATTCTTCTGGGTAAACATTCTTGAAGTTGTTAGAAAAGGAGATGACCTTGATTTCTCTGTTGGAGTCGCTACTGCTTCTTTTCCGTTAGATAGTTTCTTTGATTCTCCACAGTGCGGTTGCGGTTTGGATTGTGATATTTTAAGAATAAGAAAACTCAGATTGAATACGAAAAACCCTTCTCTTTCATCTTCATCTGCTTAG 492 0.4553 MTNLAVPLLLLTAALTLSAEPTAYEALRNFNFPEGILPQGVTRYELDESSGNFRADLNGSCRFSLQGSYQLSYNSTITGHITDNKLTDLRGISVKVLFFWVNILEVVRKGDDLDFSVGVATASFPLDSFFDSPQCGCGLDCDILRIRKLRLNTKNPSLSSSSA* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3770 163 PANTHER T31J12.3 PROTEIN-RELATED 13 160 IPR007493 -
Psa6g3770 163 SUPERFAMILY At5g01610-like 8 141 IPR036758 -
Psa6g3770 163 Pfam Protein of unknown function, DUF538 23 129 IPR007493 -
Psa6g3770 163 Gene3D - 9 135 IPR036758 -
Psa6g3770 163 PANTHER F22D16.19 PROTEIN 13 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3770 Psa-Chr6 328405818 328407156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3770 - - gmx:100808207 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3770 6 328405818 328407156 Psa6g3770 6 328405818 328407156 ECH
Psa3g0508 3 48377012 48378596 Psa6g3770 6 328405818 328407156 PCT