Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3749 ATGGAGACAAAGGTTGATAACGCGATCATTAGCTTTAATCCAAACACAACCCTTAATCAAAATCCTCAACGACCAAAGAATATCTTTAAGGTTGCACTCTTTATGATGCGAGGGAATTCTCGTAAATCATCAAAAGCGATTGTTCCAGTTGATGATGAATCTAAAGGCATATGGAGGAATCTTATTGGGTCCATGAGACCTATGCATCTTCAAAGCCACCAATCTCCGCCGCAGATTCTCAACGGTCAGAATAATCTTAAAAATATAAACGTGATTGATGAAACTGCTAATGATCATCAAGGTGAGGAAGACGGGGTTGTTCTCGCATCAGAGTCTCCGCCTAGTAGCCGATACGCTTCCGCGGTGGGGTTAAATGAAATGGTTGAGGAGGAGGAGAAAGAGGAAGAGATTGTGATTAAGGATTTTCAGAATTATGGGGATGATGGTGATAACATGATTGACGCAAAAGCTGATGAGTTTATTGCTCAATTTTATCATGAAATGAAATTGCAGCGTATGGATGTTGTGGATCATCGTTACAATGAGTTAAGTATGAGATCATTAGGCTTATGA 573 0.3997 METKVDNAIISFNPNTTLNQNPQRPKNIFKVALFMMRGNSRKSSKAIVPVDDESKGIWRNLIGSMRPMHLQSHQSPPQILNGQNNLKNINVIDETANDHQGEEDGVVLASESPPSSRYASAVGLNEMVEEEEKEEEIVIKDFQNYGDDGDNMIDAKADEFIAQFYHEMKLQRMDVVDHRYNELSMRSLGL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3749 190 PANTHER COTTON FIBER PROTEIN 19 184 - -
Psa6g3749 190 Pfam Cotton fibre expressed protein 150 182 IPR008480 -
Psa6g3749 190 PANTHER COTTON FIBER PROTEIN 19 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3749 Psa-Chr6 325725534 325726894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3749 - - gmx:100800206 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g0484 3 45361476 45362129 Psa6g3749 6 325725534 325726894 PCT