Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g3573 ATGGCTTTCCACGATCAAACTCACAAAAACGGCACCGTTTCAAAGAAACCCAAACTCCTTCCCTCTCCGATCACCGACGTTGAAATCCAATCGGAATTCTCCCACCACGACCCCACCGTCGCGCGTCTCAACAACGGCGCCTTCGGTTGTTGTCCATCCTCCGTCCTCGCAGCTCAGCGTGAATGGCAGCTCAAGTTCCTCCGTCAGCCAGATCACTTCTACTTCAACTACCTCAAAAAAGGAATCCTCCATTCCCGAACAATCATCAAAGAACTCGTCAACGCCAACCATGTCGACGAGATCTCCATAGTCGATAACGCTTCCACCGCCACCGCTATCGTCCTTCAGCAAGCCACCTGGGCTTTCCATGAAGGAAGGTTCAACAAAGGAGACGCAGTCGTCATGCTTCACTACGCTTACGGTTCCGTCAAAAAAGCCATCGAAGCGTACGTCACACGCGCCGGTGGAAGAGTTATCGAGGTTCATCTCCCCTTCCCGGTCACCTCCGAAGACGAAATCGTTCGCGAGTTTCGTCACGCGCTGGAGAAAGTAAAGAGAGAAGGTAGCAATAGTAAAGTTAGGTTAGCGGTTATCGATCACGTGACTTCCATGCCGAGCGTGGTGATTCCGGTGAAGAAGTTAGTTGAGATTTGTAGAGAAGAAAGTGTTGATCAGGTTTTCGTCGACGCGGCTCACGCGATCGGATGCATCCCGCGCGTCGACATGCAAGAAATCGGAGCAGATTTTTACACTAGCAATTTACATAAGTGGTTCTTTTGTCCATCTTCGGTAGCTTTTATCTACGCGCGTAAATCGGTTAATTCAGTTGATTTGCATCACCCTGTAGTGTCACACGAGTACGGAAATGGATTAGCAATAGAAAGTGCATGGATTGGGAATAGAGATTACAGTGCTCAATTAGTGGTTCCCACTGTTATGGAATTTGTGAATAGGTTTGAAGGTGGAATTGAAGGAATAAAAAAGAGGAATCATGATTGTGTTATTCAGATGGGTGAAATGTTGGTGGAAGCTTGGGGGACACATCTTGGGACACCACATCATATGAGTGCAAGTATGGTTATGGTTGGTTTGCCATCTGGTTTGGGGATTATGAGTGATTGTGATGCTATGAATCTTAGGACATATTTGAGGGACTTTTTTAAGGTCGAAGTTCCTATTTATTTTAGGGATGGAGTTGGGGAAGATGGAGGTGTTACTGGGTATGCTAGAATTTCTTATCAAGTGTATAATAAAGTTGAGGATTATTATAAGTTTAGGGATGCGATTAACAAGCTTGTAAGTGGTGGGTTCACTTGTGCTGATCTTTCCACTTCAACTCCTGGTAGTGTGGTCTAG 1356 0.4624 MAFHDQTHKNGTVSKKPKLLPSPITDVEIQSEFSHHDPTVARLNNGAFGCCPSSVLAAQREWQLKFLRQPDHFYFNYLKKGILHSRTIIKELVNANHVDEISIVDNASTATAIVLQQATWAFHEGRFNKGDAVVMLHYAYGSVKKAIEAYVTRAGGRVIEVHLPFPVTSEDEIVREFRHALEKVKREGSNSKVRLAVIDHVTSMPSVVIPVKKLVEICREESVDQVFVDAAHAIGCIPRVDMQEIGADFYTSNLHKWFFCPSSVAFIYARKSVNSVDLHHPVVSHEYGNGLAIESAWIGNRDYSAQLVVPTVMEFVNRFEGGIEGIKKRNHDCVIQMGEMLVEAWGTHLGTPHHMSASMVMVGLPSGLGIMSDCDAMNLRTYLRDFFKVEVPIYFRDGVGEDGGVTGYARISYQVYNKVEDYYKFRDAINKLVSGGFTCADLSTSTPGSVV* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g3573 451 Pfam Aminotransferase class-V 78 273 IPR000192 -
Psa6g3573 451 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 13 443 - -
Psa6g3573 451 PANTHER L-CYSTEINE DESULFHYDRASE 13 443 - -
Psa6g3573 451 SUPERFAMILY PLP-dependent transferases 33 433 IPR015424 -
Psa6g3573 451 Gene3D - 69 309 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g3573 Psa-Chr6 301068008 301070047 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g3573 K22207 - gmx:100796732 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g3573 6 301068008 301070047 Psa6g3573 6 301068008 301070047 ECH
Psa3g0350 3 34188459 34192993 Psa6g3573 6 301068008 301070047 PCT