Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2932 ATGTCCTTTTCTAACTCAGCTGCTGCTGCAACTGGTACTTTGGTTCAACATGGTGGCAATGCCACTAATAATAACAGTTTGATCCAAAAGAATGCCACTTCTCCACATTCACACCACAAAGCTAATAATTACTTGCCAAACCCATTTGAACTTCATGATTCTCAAATCTTGGACAAAGTCTATCTCACACATGTCACTGATGATCAGTTTTGTGATACTGATATTATTTTCGACCTTGTCTCCACTCTTGTACTTCAGACTAATACACAGATTCCTGTTACCGGTTTCAAACCAGATTTTCCTACATTGAAGCTGATTTCTTGTCAGATGATAACTACACGTAGTGCTGCACACTGTGTTCACCAAACAACACTGTGGATTCTCCAAAACCTGAGATCCTACTCTTGGGATGCAAAAGCACTTATAACTCTAGCTGCATTCACTTTGGAGTATGGAAACTATTTGCACCTTACTAGGGTCACAGCAACAGACCCAATTGGAAACTCGTTGAGACAACTGAATCAAATTCAAACCAGAAATATCTCAACTGATATAACTGAATTGGTCTCATTCATAGTGCATCAGTTGCTGCACCTAAAAGAGTGGGCAACATGGTCTGCGGAAGGCTATGATCCAGAAGATGTTCCTGCTTTGACAGAAGCCTTGCAAGAGATTCCTGTCTTTGTTTATTGGACAATTGCTTCCATTGTCGCTTCTACCGGCAATCTAGTCGGTGTTTCGGACTATAAATTATCAGAGTATAGAGAGAGGCTTTCTGGCATTGTTCAGAAATTGGTTGTGCATTTGAACAATTGCAAGCTACAAATAAGCTACATAGACGATTTATTTAACCGCAGGAAGATCTTTGATAAGCCCAAAGATATTGTTGATTGTTTGAAAGCCTTGATCCACCGTAACGGAACTGATAGTCCTCAGATCTATGAAGGTGCCATTCATGTTAAAACGGGTCTTGAAGTTTTTAGGAACAAACATGTATTGGTGTTCATTTCGAGTCTTGATAGCATTGAAGATGAGATTTCACTTTTGAATTCAATCTATGAAAGATTGCAAGAAAACTCAAAAGAATCAATAAAAGGTTTCAAGAAAGAAGACTTCAAGATTTTGTGGATCCCCATTGTGAACAATTGGGACGATATTCGCAAGGAACGTTTCAGAGCATTGAAGAGCGGAATCAAATGGTATGCAGTGGAGTATTTCTATGAGTTACCAGGCCACAGGATAATAACAGATCCAGAAAGAATAGGGTACATTGGTAATCCAATTATCCCAGTGTTCAACCCTCAAGGTTACATAACAAATATAGATGCTATGGACTTGATTTTCCAATGGGGGATAGATGCATTCCCATTTAGGAAAAGTGATGGTATTGACCTTACTTTAAAGTGGAAGTGGCTTTGGGATGTAATAAAAAAAGCAACTCCTGGACTACAGGTGAAAGGGGACAGATACATCTTTATCTATGGTGGTACCAACAACAAATGGATCCAAGATTTCACACTTGAGCTAGAAAAGATCAAAAGGCACGAGATTCTGAAACGCGCTGATGTTATAATAGAGAATTATCAATTGGGCAAAGAAGACCCTAACCGCGTTCCTAGTTTCTGGATTGGTGTAGAAAGGAAGAAACAAAACAAGAAGCATCAAGAAGCACTGGACTGTGAGATTCAAGACATTGTGAAAAGCTTGTTTTGTCTGAAAAGGGATCCACAAGGATGGATTATTCTAAGCAAAGGACAGAACATTAAGCTTCTGGGTCATGGGGAACCTGCTTATCAAACATTGGCTGAGTTTCAGAATTGGAAAGATAGAGTGTTGGAGAAGGAAGGGTTTGATATTGCATTCAAAGAGTATTATGAGATGAAGGCTAAAGAGCTATCTGGTCGTCAACCATGTGAAGTTGTTAATGTCGATACTTATAGCTCAAATGTTATAGCTACTATAGCATGCCCAAATCCTATGTGTGGACGTGTGATGGAGGTTTCATCTGTTCATTACAAGTGCTGCCATCGTGATGAACCAAATAATTTTGGTGTTTGA 2058 0.3921 MSFSNSAAAATGTLVQHGGNATNNNSLIQKNATSPHSHHKANNYLPNPFELHDSQILDKVYLTHVTDDQFCDTDIIFDLVSTLVLQTNTQIPVTGFKPDFPTLKLISCQMITTRSAAHCVHQTTLWILQNLRSYSWDAKALITLAAFTLEYGNYLHLTRVTATDPIGNSLRQLNQIQTRNISTDITELVSFIVHQLLHLKEWATWSAEGYDPEDVPALTEALQEIPVFVYWTIASIVASTGNLVGVSDYKLSEYRERLSGIVQKLVVHLNNCKLQISYIDDLFNRRKIFDKPKDIVDCLKALIHRNGTDSPQIYEGAIHVKTGLEVFRNKHVLVFISSLDSIEDEISLLNSIYERLQENSKESIKGFKKEDFKILWIPIVNNWDDIRKERFRALKSGIKWYAVEYFYELPGHRIITDPERIGYIGNPIIPVFNPQGYITNIDAMDLIFQWGIDAFPFRKSDGIDLTLKWKWLWDVIKKATPGLQVKGDRYIFIYGGTNNKWIQDFTLELEKIKRHEILKRADVIIENYQLGKEDPNRVPSFWIGVERKKQNKKHQEALDCEIQDIVKSLFCLKRDPQGWIILSKGQNIKLLGHGEPAYQTLAEFQNWKDRVLEKEGFDIAFKEYYEMKAKELSGRQPCEVVNVDTYSSNVIATIACPNPMCGRVMEVSSVHYKCCHRDEPNNFGV* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2932 685 Pfam Sieve element occlusion N-terminus 102 290 IPR027942 -
Psa6g2932 685 Coils Coil 339 359 - -
Psa6g2932 685 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 20 680 IPR039299 GO:0010088
Psa6g2932 685 PANTHER SIEVE ELEMENT OCCLUSION-RELATED 20 680 - -
Psa6g2932 685 Pfam Sieve element occlusion C-terminus 484 676 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2932 Psa-Chr6 244645152 244648443 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2932 - - aip:107618603 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2932 6 244645152 244648443 Psa6g2932 6 244645152 244648443 ECH