Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2931 ATGTCTATTGCACTGTCCTATGTTGCACCAAATGGTGGTAAGATCCAACAGAATGGTACCTCCCAACAACAGCAGAAATCTCAGCTCCCTAACCCCTTTGAACTTGAAGACTATCATATTCTCAACAAAGTTTATCTCACTCATGTCAATGATGACGAGAAATATGATAAGGATCTGCTTTTCAACCTTGTCTCGAACATCATCTCTGGTTCTTCTCAAATTTCTGGAACTAATCAAGTACTAAACACTCAGATTTCTTTCAAACCAGACTTCCCTGCCTTGAAGAGGATTTCTTGTCAGATGATAACGACGCGTGGCACGGCAGAATGTGCACACCAAACAACAATGTGGATTCTGCAGCATCTCAGAGGCTTCTCATGGGATGCAAAAGCATTGATAACTCTAGCACTCTTTGGATGGGCAACATGGTCTACTATGGGTTATGATATAGAGGAAGTCCATTCTTTGTCTGACGCAATGCAAGAGATTCCTCTTGTTGTGTATTGGACTGTTGCTACCGTTGTTGCTTGCTCCGGCAACCTCGTCGGTATATCGGAGCATATATTATCAGATTATAGAAAAAGGCTTTCTGGTGTGATTATGAGATTGAAGGATCATTTGGAAAATTCCAAAGTGCAAATTGATAGGATAGACGATTATTATAGACGTTTGAAAGAGTCTGAAAACATTAAAGGTGTTGTTGGTTTCTTGAGACTTCTGATACAAGGCAATGGTTCTGATCAAATACCACTAATATATAAAGGCAACATCCAAGTTAGAACGGGTCTTGAAGTCTTCAAGCAGAACTATGTATTACTGTTCATTTCGGGTCTAGACAGCATTGGAGATGAGATTTTGCTGTTAAATTCAATCTATAACAGATTGCAGGATAATCCGCAAGAAGTGATAAAAGGTTTCAAGAAAGAGGATTTCAAGATTTTGTGGATTCCCATTGTTGATATATGGGATGAAGTTGCCAAGAATCAGTTCAGAATTTTGAAGGAAAGCATGAAATGGTATGTGTTGGAATATTTTTCTGAGCTACCGGGAGTTGGGATTATAAAGAACAGATTGAATTATGTGGATAATAAGCCTATTGTGCCAGTGATCAATCCTCAAGGTGAAATAATGAATGAGAATGCAATGGAAATCATTTTTCAATGGGGATTTGATGCTTTTCCTTTTAGGAAAATGGATGGTGATGATCTCTTTAAGAAATGGGCTTGGTTTTGGAATTTAATGAAGAAAGTTGATATCAACATAGAGGACATGAAAAGGGATACTTACATATTCATCTATGGCGGAAACGACCCTAAGTGGATACAAGACTTCACAAGAGCAATAGGAAACATTCAAAAAAATCAAAGCATCAAGAATGTGGACATTAACATAGATTACTATCAATTAGGAAAACAAAACCCGGCAAAGATTCCTTACTTTTGGATTGGCATAGACGGAAGAAAACAGAACAAAATATGTCATGACAGAGTAGACTGCGAAATACAAGAGGCAGTAAAAAGCTTGCTATGTCTCAAGCAAGACCCGCTGGGATGGGTTCTTCTTAGTAAAGGTTATCACGTTACACTTTTGGGTCATGGTGAACCTATGTATCAAACTGTGGCTGATTTTGAGAAGTGGAAAGACAATGTGGTTGAGAAAGAAAGCTTTGACATAGCTTTCAAAGAGTATTATAATACTAAGCTGAAAGAGATGTCATCTAGTGTTTCTTGTGCTGTTAATTCTTCAGATGTTCTTGCTACTATAACTTGTCCTAATCCTACTTGTGGACGTGTGATGGAGGTGACTTCTGTCAATTACAAGTGTTGTCATCGTGATGATCAAAATAGTTGCTGCATTTGA 1860 0.3806 MSIALSYVAPNGGKIQQNGTSQQQQKSQLPNPFELEDYHILNKVYLTHVNDDEKYDKDLLFNLVSNIISGSSQISGTNQVLNTQISFKPDFPALKRISCQMITTRGTAECAHQTTMWILQHLRGFSWDAKALITLALFGWATWSTMGYDIEEVHSLSDAMQEIPLVVYWTVATVVACSGNLVGISEHILSDYRKRLSGVIMRLKDHLENSKVQIDRIDDYYRRLKESENIKGVVGFLRLLIQGNGSDQIPLIYKGNIQVRTGLEVFKQNYVLLFISGLDSIGDEILLLNSIYNRLQDNPQEVIKGFKKEDFKILWIPIVDIWDEVAKNQFRILKESMKWYVLEYFSELPGVGIIKNRLNYVDNKPIVPVINPQGEIMNENAMEIIFQWGFDAFPFRKMDGDDLFKKWAWFWNLMKKVDINIEDMKRDTYIFIYGGNDPKWIQDFTRAIGNIQKNQSIKNVDINIDYYQLGKQNPAKIPYFWIGIDGRKQNKICHDRVDCEIQEAVKSLLCLKQDPLGWVLLSKGYHVTLLGHGEPMYQTVADFEKWKDNVVEKESFDIAFKEYYNTKLKEMSSSVSCAVNSSDVLATITCPNPTCGRVMEVTSVNYKCCHRDDQNSCCI* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2931 619 Pfam Sieve element occlusion N-terminus 147 226 IPR027942 -
Psa6g2931 619 Pfam Sieve element occlusion N-terminus 36 138 IPR027942 -
Psa6g2931 619 PANTHER THIOREDOXIN-LIKE, SIEVE ELEMENT OCCLUSION-RELATED 140 617 - -
Psa6g2931 619 PANTHER THIOREDOXIN-LIKE, SIEVE ELEMENT OCCLUSION-RELATED 18 138 - -
Psa6g2931 619 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 140 617 IPR039299 GO:0010088
Psa6g2931 619 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 18 138 IPR039299 GO:0010088
Psa6g2931 619 Pfam Sieve element occlusion C-terminus 473 610 IPR027944 -
Psa6g2931 619 Pfam Sieve element occlusion C-terminus 405 474 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2931 Psa-Chr6 244639951 244642590 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2931 - - vun:114189897 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2931 6 244639951 244642590 Psa6g2931 6 244639951 244642590 ECH