Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2930 ATGTCACTGTCCAATGGAACTAAACTTCCAAACCCATTTGATCTGAATGATTCTCACATCCTGGATAAAGTTTATCTGACCCACCTCCATGATGATGACAAATGTGATAAAGAAGTCCTTTTCCACATTGTATCCAATGTTATACTTAAGACAAGGCTAGCAGAAAGCAGAGCTGGTGTAACAGGTTTCCAACCAGAATTCCGCACACTGAAGCTGATTTCTTGTCAGATGATAACAACGCCTCACGGCGAACGTTATGTACACCAAACAACAATGTGGATTCTTCAACACCTGAAAACTTATTCATGGGATGCAAAAGCACTTGTTACTCTTGCTGCTTTCACTTTGGCATATGGAAACCTTTTGTACCTCACTGATACTTCAACTTCAGATCAACTTGTTAACACTTTGAAACAGCTGAATCAAATTCAAAACAGAAAGGTCACTCTTCCTGTTACAGATTTGGTGGATTTGATAATGGAAGTGTTTCTGCATATTCATGAGTGGGCCACTTGGTCTAGTGTTGGTTATGATACTCTTGAAGTTCCTTCTTTGTCTGATGCATTGGAAGATATCCCTGTTGCTGTTTATTGGATAATTGCTTCCATTGTTGCTGCTAATGGCAACATCGTTGGTGTATCGGACTATGCGTTATCGAATTTTAAAGACAGGCTCTCTTTGGTTGATTCTAAATTGAAGGAACATCTGAAACTGAGCAAAGGACAAATAGATACTGTAGAAGAATACTTGAAGCGCAAGAAAGCAATTTCAAATCCTAAAGATATTGTAGATTTCTTGAAGCTTTTGATCCAACGCAATGGAGATAATCTTCTAATATATGATGGCAACACCAAAACTAAAATGGATATTGAAGTGTTCAGAGAGAAATATGTGTTATTGTTCATTTCAAGCCTCCACAAAGTTGAAGATGAGATTCTGCTTTTGAATTCTATCTATGACAGATTGCATGACAATCCACAAGAAATAGTGAAAGGTTACAAAAAAGATGATTTCAAGATTTTGTGGATCCCCATCTGCGGTGACAACCAGAATATCAAGTTTGATCTTCTAAAGAACAAGATCAAACTTTATGCAGTAGAGTACTTCTCTGAATTACCAGGCATTGGACTCATACGAGAGAAGTTGAATTATTGGGATAAGCCTATTGTTCCAGTGTTGAGCCCTTTGGGTGAAATAATGAATGATGATGCAATGGACTTGATTTTTCAATGGGGAATAGATGCATTCCCTTTTAGGAAAAAGGATGGTTATGATCTTACTCAAAAATGGAAGTGGTTCTGGGATGCTACAAAGAGAGTCAATCTTGGAATACAGGTGAAAGGGGACAGATACATCTTCATCTATGGAGGTGGTGACAAAAAATGGATTCAAGACTTCACATTAGCATTGGAGAAAATAAAAAGGCATGAAACTATCATAAGGGCAGATGCTATAATAGAACACTATCATTTGGGAAAAGATGAGCCTAAGATTGTTCCTCGTTTTTGGATTGAAATAGAAAGCAAGAGACTTAAAAAGCACCAAGATGGTCTAGACTGTGAGATTCAAGATATTGTGAAGAGTTTGCTTTGTCTGAAACAAGATCCACAGGGTTGGGCTATTCTGACGAAAGGGTACAATGTTAAGGTTTTGGGTCATGGGGAAGCTATGTATCAAACGCTGGCTGATTTTGATATATGGAAAGATAAAGTGCTTCAAAAAGAAGGGTTTGATATTGCTTTCAGAGAATATTATGAGACAAAGGTGAGAGATACAAATGTTCGGCAGCCATGTGAAATTATCAATGTTGATAATAATATTAATGGAAATGTTATAGCTACCATATCATGCCCAAATCCAACTTGTGGGCGTGTGATGGAGGTGTCATCAGTTAACTACAAGTGCTGCCACCACGATGATACTCCACAGAATGGCAAAATCTGA 1944 0.3776 MSLSNGTKLPNPFDLNDSHILDKVYLTHLHDDDKCDKEVLFHIVSNVILKTRLAESRAGVTGFQPEFRTLKLISCQMITTPHGERYVHQTTMWILQHLKTYSWDAKALVTLAAFTLAYGNLLYLTDTSTSDQLVNTLKQLNQIQNRKVTLPVTDLVDLIMEVFLHIHEWATWSSVGYDTLEVPSLSDALEDIPVAVYWIIASIVAANGNIVGVSDYALSNFKDRLSLVDSKLKEHLKLSKGQIDTVEEYLKRKKAISNPKDIVDFLKLLIQRNGDNLLIYDGNTKTKMDIEVFREKYVLLFISSLHKVEDEILLLNSIYDRLHDNPQEIVKGYKKDDFKILWIPICGDNQNIKFDLLKNKIKLYAVEYFSELPGIGLIREKLNYWDKPIVPVLSPLGEIMNDDAMDLIFQWGIDAFPFRKKDGYDLTQKWKWFWDATKRVNLGIQVKGDRYIFIYGGGDKKWIQDFTLALEKIKRHETIIRADAIIEHYHLGKDEPKIVPRFWIEIESKRLKKHQDGLDCEIQDIVKSLLCLKQDPQGWAILTKGYNVKVLGHGEAMYQTLADFDIWKDKVLQKEGFDIAFREYYETKVRDTNVRQPCEIINVDNNINGNVIATISCPNPTCGRVMEVSSVNYKCCHHDDTPQNGKI* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2930 647 Pfam Sieve element occlusion C-terminus 496 637 IPR027944 -
Psa6g2930 647 Pfam Sieve element occlusion N-terminus 16 255 IPR027942 -
Psa6g2930 647 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 7 640 IPR039299 GO:0010088
Psa6g2930 647 PANTHER SIEVE ELEMENT OCCLUSION-RELATED 7 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2930 Psa-Chr6 244634058 244637211 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2930 - - gmx:100800217 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2930 6 244634058 244637211 Psa6g2930 6 244634058 244637211 ECH