Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2581 ATGAGTCTGAAACCTCTAAACATGTTACTCGTTCCATTTCTTCTGCTTATTCTCGCGGCTGATTTTCCTTTGAAAGCAAAAGGATCACTACTACCATTCATAGATTCTCCCAACACTCTCTTATCGGATCTCTGGTCTGATCGTTTCCCAGATCCGTTTCGCGTCTTAGAACAAATTCCCTATGGAGTTGAGAAACACGAACCATCCATAACATTGTCACATGCTAGAGTAGACTGGAAGGAAACTCCAGAGGGACATGTGATAATGGTGGACGTGCCTGGGTTGAAAAAAGATGATATAAAGATAGAAGTGGAAGAGAATAGGGTGCTAAGAGTGAGTGGTGAGAGGAAGAAAGAAGAAGATAAAAAAGGAGATCATTGGCACAGAGTTGAAAGATCTTATGGAAAGTTCTGGAGGCAGTTTAAATTACCTCAAAATGTTGATTTGGATTCTGTCAAAGCTAAAATGGAAAACGGTGTTCTTACTTTAACTCTTCATAAGTTGTCGCATGATAAGATTAAAGGTCCTAGAATGGTTAGTATTGTGGAAGAGGATGACAAACCATCTAAGATCGTCAATGATGAGTTGAAATAA 594 0.3923 MSLKPLNMLLVPFLLLILAADFPLKAKGSLLPFIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLSHDKIKGPRMVSIVEEDDKPSKIVNDELK* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2581 197 SUPERFAMILY HSP20-like chaperones 70 174 IPR008978 -
Psa6g2581 197 Pfam Hsp20/alpha crystallin family 78 181 IPR002068 -
Psa6g2581 197 ProSiteProfiles CS domain profile. 72 179 IPR007052 -
Psa6g2581 197 CDD ACD_ScHsp26_like 76 167 - -
Psa6g2581 197 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 15 188 - -
Psa6g2581 197 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 15 188 - -
Psa6g2581 197 Gene3D - 36 181 IPR008978 -
Psa6g2581 197 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 68 184 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2581 Psa-Chr6 193129422 193130522 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2581 K13993 - gmx:100500319 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2581 6 193129422 193130522 Psa6g2581 6 193129422 193130522 ECH