Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2571 ATGTCAGACTCAAAGGATTCATTGGTGATATCATTTGGTGAGATGCTTATAGATTTTGTTCCAGACACAGCTGGTGTGTCTTTGGCTGAGTCTCTTGGTTTCCTCAAAGCTCCTGGTGGTGCTCCGGCAAACGTGGCTTGTGCCATAGCTAAACTCGGTGGCAATGCTGCCTTCATTGGCAAGGTGGGGGAGGATGAATTTGGAAGGATGCTTGCTAACATATTGAAGAAAAATGGTGTGAATACAGATGGTGTTCTTTTTGACAAAGAGGCTAGAACTGCATTGGCTTTTGTGACATTGAGGAAAGATGGAGAGAGGGAGTTCATGTTTTATAGAAACCCTAGTGCTGACATGTTACTAACAGAATCTGAATTGAAAATGGATTTGATCAAGAAGGCCAAGATATTCCATTATGGATCTATCAGTCTTATCACTGAGCCATGCAGATCTGCTCACGTGGCTGCCATGAAAGCTGCTAGAGAAGCTGGTGCTTTGTTGTCATATGATCCAAATGTCAGGCTACCTCTGTGGCCTTCTGCTGAGGCAGCTAGGACGGGAATCAAAAGTATTTGGCTTGAGGCTGATTTCATTAAGGTGAGTGATGATGAAGTTGAATTTCTTACTCAAAAAGATGCTCAGAATGAAGAAGTTATTAGGTCTCTGTGGCATGACAGGTTGAAGCTGCTTCTTATCACCGACGGAGAGAAGGGTTGCAGATATGTCACTAAGAACTTTAAAGGAAACGTAAGTGGATTCAAGGTGAATGCAGTTGACACAACGGGTGCTGGTGATGCTTTTGTTGGTGCACTTCTCACAGCTGTGGCCAGAGACACTTCCATATTCGATAATGAAGCAAAACTGAGAGAGGCCTTGACATTTTCAAATGCTTGTGGAGCAATGTGTACAACACAGAAGGGAGCTATTCCTGCACTTCCAACTGCTGAAGAGGCTAAGAAATTCATCAGCTCTAAAGCCAATTAA 981 0.4343 MSDSKDSLVISFGEMLIDFVPDTAGVSLAESLGFLKAPGGAPANVACAIAKLGGNAAFIGKVGEDEFGRMLANILKKNGVNTDGVLFDKEARTALAFVTLRKDGEREFMFYRNPSADMLLTESELKMDLIKKAKIFHYGSISLITEPCRSAHVAAMKAAREAGALLSYDPNVRLPLWPSAEAARTGIKSIWLEADFIKVSDDEVEFLTQKDAQNEEVIRSLWHDRLKLLLITDGEKGCRYVTKNFKGNVSGFKVNAVDTTGAGDAFVGALLTAVARDTSIFDNEAKLREALTFSNACGAMCTTQKGAIPALPTAEEAKKFISSKAN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2571 326 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 258 271 IPR002173 GO:0016773
Psa6g2571 326 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 39 63 IPR002173 GO:0016773
Psa6g2571 326 PANTHER HEXOKINASE FAMILY MEMBER 3 324 - -
Psa6g2571 326 Pfam pfkB family carbohydrate kinase 8 313 IPR011611 -
Psa6g2571 326 Gene3D - 5 326 IPR029056 -
Psa6g2571 326 CDD bac_FRK 8 308 - -
Psa6g2571 326 SUPERFAMILY Ribokinase-like 9 321 IPR029056 -
Psa6g2571 326 PANTHER FRUCTOKINASE-5-RELATED 3 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2571 Psa-Chr6 191488054 191489897 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2571 K00847 - gmx:100791294 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2571 6 191488054 191489897 Psa6g2571 6 191488054 191489897 ECH