Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2570 ATGGCATCATCATGTGTAGGAACTTTATCCTCCCCCAACCCCTCTCTATTTTTCTCACAAACCAAACATATGGCATCAACAAGGAGGAGAGTTATAAAAGCATCTGTCACAGAGAAACTTGGCATCAAGATTGAGAAGAACCCTCCTGAGTCCAAGCTCACTCAACTTGGTGTTAGACAATGGCCCAAATGGGGTTGCCCTCCAAGCAATTTTCCATGGACATATGATGCAACAGAAACATGCTATCTTCTTGAAGGAAAAGTGAAGGTCACTCCTAGTGGAGCTAATGAGGCTGTTGAAATTGCTGCTGGTGACTTGGTTGTGTTTCCTAAAGGAATGAGTTGCACTTGGGATGTTTCTGTTGGTGTTGATAAGTAG 378 0.4339 MASSCVGTLSSPNPSLFFSQTKHMASTRRRVIKASVTEKLGIKIEKNPPESKLTQLGVRQWPKWGCPPSNFPWTYDATETCYLLEGKVKVTPSGANEAVEIAAGDLVVFPKGMSCTWDVSVGVDK* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2570 125 CDD cupin_TM1112-like 61 125 - -
Psa6g2570 125 PANTHER OS04G0445200 PROTEIN 22 125 - -
Psa6g2570 125 PANTHER OS04G0445200 PROTEIN 22 125 - -
Psa6g2570 125 SUPERFAMILY RmlC-like cupins 52 119 IPR011051 -
Psa6g2570 125 Gene3D Jelly Rolls 30 125 IPR014710 -
Psa6g2570 125 Pfam EutQ-like cupin domain 54 125 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2570 Psa-Chr6 191485778 191486831 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2570 K06995 - gmx:100527470 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2570 6 191485778 191486831 Psa6g2570 6 191485778 191486831 ECH