Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g2569 ATGAATTTAAACCATGTTAAGGTGGATATGGAGACAAAAACAGCGTGGGTTGAAGGTGGTGCAACATTGGGAGAAACTTACTATGCTATCTCTCAGGCAAGTGATGTATATGGGTTCTCAGCTGGGTCATGTCCAACTGTAGGAGTTGGCGGACTTATCGGCGGTGGTGGATTCGGTCTGTTGTCTAGAAAATATGGACTTGCAGCCGATAACGTGCTGGATGCGTTACTTGTCGATGCTGAAGGACGGTTATTAGACCGCAAAACCATGGGAGATGATGTGTTTTGGGCTATTAGAGGAGGAGGGGGTGGTGTTTGGGGAATTGTGTATGCATGGAAAATTCAGTTACTGAAAGTGCCACAAATTGTAACTAGTTGTAGTGTACCTAGAACAGGAGCAAAGAGGGATATTGCTAAACTACTGAACAAATGGCAATATGTGGCACCAAATTTGGAAGATGATTTCTACTTGTCATGCTTAGTTGCTGCTGCAGGTTTGCCTGAAGCTAAAAATGTTGGCCTATCAACAACATTTAATGGTTTTTATCTTGGTCCTAAGTCCAATGCTATATCTATACTGAATCAAGATTTTCCTGAATTGAATGTTGTAGACGAAGAATGTAGTGAAATGAGTTGGATTGAGTCAATTGTTTTCTTTTCTGGACTAAAAGATGGAGCTTCTGTTTCTGACTTGGGGAATAGGTACTTGCAAGATAAACAATATTTCAAAGCAAAATCAGATTATGTAAGGAGCAATGTTTCACTTTTCGGTATAGAAACTGCGTTGGGTTTTCTAGAAAAGGAGCCTAAAGGGTCTGTTGTTTTGGACCCTTATGGAGGGATTATGAATAATATAAGCAGTGATTCCATTGCTTTTCCGCACAGAAAAGGAAACATTTTTTCAATTCAGTACTTGATTTATTGGAAAGAAGAAGACAATGACAAAAGTAGTGACTATATTGATTGGATAAGAGGATTCTATTCTTCTATGACTCATTTTGTTTCACAGGATCCAAGGGCTGCATACGTTAATTACATTGATTTTGATCTTGGAGTAATGGGGGTGATTAGTTTGAATGATGTGGTTAACCCAAGGGTTTGGGGTGAAAAGTATTTCTTGAGTAATTATGATAGACTTGTGATAGCCAAGACTTTGATTGATCCTAACAATGTTTTCACCAATGAACAAGGCATTCTTCCTAAGACCTTTGCTAGCTCCAATGCCAAAGTACTTAGTACACAAATGTTCTAG 1251 0.3893 MNLNHVKVDMETKTAWVEGGATLGETYYAISQASDVYGFSAGSCPTVGVGGLIGGGGFGLLSRKYGLAADNVLDALLVDAEGRLLDRKTMGDDVFWAIRGGGGGVWGIVYAWKIQLLKVPQIVTSCSVPRTGAKRDIAKLLNKWQYVAPNLEDDFYLSCLVAAAGLPEAKNVGLSTTFNGFYLGPKSNAISILNQDFPELNVVDEECSEMSWIESIVFFSGLKDGASVSDLGNRYLQDKQYFKAKSDYVRSNVSLFGIETALGFLEKEPKGSVVLDPYGGIMNNISSDSIAFPHRKGNIFSIQYLIYWKEEDNDKSSDYIDWIRGFYSSMTHFVSQDPRAAYVNYIDFDLGVMGVISLNDVVNPRVWGEKYFLSNYDRLVIAKTLIDPNNVFTNEQGILPKTFASSNAKVLSTQMF* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g2569 416 PANTHER OS08G0158400 PROTEIN 1 406 - -
Psa6g2569 416 Pfam Berberine and berberine like 341 398 IPR012951 GO:0016491|GO:0050660
Psa6g2569 416 ProSiteProfiles PCMH-type FAD-binding domain profile. 1 119 IPR016166 GO:0071949
Psa6g2569 416 SUPERFAMILY FAD-binding/transporter-associated domain-like 2 120 IPR036318 GO:0050660
Psa6g2569 416 Gene3D - 122 337 - -
Psa6g2569 416 Gene3D - 7 400 IPR016169 -
Psa6g2569 416 Pfam FAD binding domain 3 85 IPR006094 GO:0050660
Psa6g2569 416 PANTHER FAD-BINDING BERBERINE FAMILY PROTEIN 1 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g2569 Psa-Chr6 191469780 191474439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g2569 2 398 Miscellaneous Gene Families AT1G30760 42.462 2.07e-104 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g2569 - - gmx:100790761 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g2569 6 191469780 191474439 Psa6g2569 6 191469780 191474439 ECH