Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1476 ATGTCCAATCTCTGCACTTCTTCTAACACTACTGCTTCTTCAACTTTCAACTTCAACATTCAACCTCTCAAATTCAACCACTCAACTAGGAACCATCGCAGCAGAAATTTTCGGGTCAAAATGTGCTCCTCCATTCCACAAAACGCCACCGTTGTTGGTTGTGGATCGCTGACCGTCGATTTCTTGGCCACCGTTGCTGCTTACCCCAAGCCAGATGACAAAATCAGAACCACCACCTTGAAGGTTCAAGGAGGTGGCAATGCAGCCAATGCTTTAACCTGTCTCGCTCGATTAGGTCTAAACACAAGGCTCATTTCTAAGATTGCAGATGACAGCCAAGGCAGGGGTATGTTAGAGGAGCTACAAATTGATGGTGTAGATACATCCTTTATTGTGGTATCTAAAGAGGGAACTTCACCATTTACATATATTATTGTGGACAACGAAACGAAAACTCGTACTTGTATACATACCCCTGGATATCCTCCAATGATACCCCAAGATCTTTCAGAATCGAGTTTGTTATCTGTATTGGATGGAGCAAGCATTGTATATTTTGATGGGAGGTTGTATGAAACTGCTCTAGTTGTTGCCCGTGAGGCAGCTAGGAAGAATATACCCATCTTAATTGATGCAGAAAGACCAAGGGAAGGGTTGGATGATCTCCTGAAATTAGCTGATTATGTTGTATGCTCAGCGAAGTTTCCAAAGGCATGGACAGAGGCATCAACTGTTCCACGAGCACTTGTTTCTATCCTTTTAAGGCTGCCCAATGTAAAATTTGTGGCTGTAACTTTGGGAAAAGATGGTTGTATAATGCTTGAGAGAAGTGTTAATGCAAGTCCTTCCACGGAAGAAGTGGATGTAGACAGCTTATTAGAATCACTGGAGTTAAGAAAGGATAAGAGTGCATCCGTTCCAACCTGCATATCATCGTCAGTGGCAAAATTGAAGGCAGAGGGAATAGGAACAGTTACTGGGAAACTATACATTGGTACTGCTGAGAGCGTTCCACCATCAGAGCTGATTGATACCACTGGTGCTGGCGATGCATTTATTGGAGCTGTGATCTATGCTATTTGTTCGAAGTTCTCACTGGAGACAATGCTGCCCTTTGCTGCTAATGTGGCAGGTGCGAAATGCAGGGATCTAGGAGCACGAAGTGGTCTTCCATACCGTGCAGACCCACGTTTAGCATCATTTATTAAGTAG 1212 0.4373 MSNLCTSSNTTASSTFNFNIQPLKFNHSTRNHRSRNFRVKMCSSIPQNATVVGCGSLTVDFLATVAAYPKPDDKIRTTTLKVQGGGNAANALTCLARLGLNTRLISKIADDSQGRGMLEELQIDGVDTSFIVVSKEGTSPFTYIIVDNETKTRTCIHTPGYPPMIPQDLSESSLLSVLDGASIVYFDGRLYETALVVAREAARKNIPILIDAERPREGLDDLLKLADYVVCSAKFPKAWTEASTVPRALVSILLRLPNVKFVAVTLGKDGCIMLERSVNASPSTEEVDVDSLLESLELRKDKSASVPTCISSSVAKLKAEGIGTVTGKLYIGTAESVPPSELIDTTGAGDAFIGAVIYAICSKFSLETMLPFAANVAGAKCRDLGARSGLPYRADPRLASFIK* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1476 403 Gene3D - 49 388 IPR029056 -
Psa6g1476 403 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 344 357 IPR002173 GO:0016773
Psa6g1476 403 CDD ribokinase_group_B 51 392 - -
Psa6g1476 403 Pfam pfkB family carbohydrate kinase 51 278 IPR011611 -
Psa6g1476 403 Pfam pfkB family carbohydrate kinase 333 391 IPR011611 -
Psa6g1476 403 PRINTS Ribokinase signature 53 74 IPR002139 GO:0016301
Psa6g1476 403 PRINTS Ribokinase signature 80 99 IPR002139 GO:0016301
Psa6g1476 403 PRINTS Ribokinase signature 262 273 IPR002139 GO:0016301
Psa6g1476 403 SUPERFAMILY Ribokinase-like 49 395 IPR029056 -
Psa6g1476 403 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 42 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1476 Psa-Chr6 71639245 71645739 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1476 - - mtr:MTR_1g069320 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1186 3 108628322 108631344 Psa6g1476 6 71639245 71645739 PCT