Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1387 ATGCTGCTTAGAAACAGATCAAGAGCTGTAACCAAACAAAGTCTAATGGGTGAACAACAATCACCAAGTCAAAACTTCACAAACACAATCCCTTCTCTATTTGGTTCATCAAACTATAGAGACTTTCATTTCACTTCCAAAAAAGCTGAATCTTTGATAAGTCCAACATCGATTCTTGACACAAAAGCTTTATCTCATTTTGAGAATCCTTTCTCAGTTAACAATAGGAACAACAACAACAACAACAAAGTTTGTAGCTCAAGGGACAAACTAGATTCGAAAAACGTAGGACTTGGTCTTGTTGGTGTTCTAAAAGATGAACAGCCTTTTCATCAAAATTCTGAAAAAATAAGGAATAGAAAAGTTCTGTTTGGAACTGATCAGCTTAGAGTGAAAATCCCTCCTCTACCAACTTCCACGTTTGAGTCAAAAAGTGATTTTGGTAGCAAAATGAATTATTCTTCATCATCAGAAAAAGGTGTTCTTAGTTTGAGTGAAATGGAGGTTTATGAAGAATACACATGTGTGATATCTCATGGAGCAAATCCAAAAACAACACATATATTCGATAATTGTGTTGTGGGAAGTTACTGTTCTGTCCCTAATAGTCCTCACTCTTTTTCACTTGATTTTCTTAGCTTTTGTTACACTTGCAAAATTCATCTTCAGCATACAAAAGACATCTTCATTTACAGAGGAGAAAAAGCTTTTTGCAGTCAAGAATGTCGTAACCAAGAGATGATGTTAGATGAAGGAGAAAATTAA 765 0.3464 MLLRNRSRAVTKQSLMGEQQSPSQNFTNTIPSLFGSSNYRDFHFTSKKAESLISPTSILDTKALSHFENPFSVNNRNNNNNNKVCSSRDKLDSKNVGLGLVGVLKDEQPFHQNSEKIRNRKVLFGTDQLRVKIPPLPTSTFESKSDFGSKMNYSSSSEKGVLSLSEMEVYEEYTCVISHGANPKTTHIFDNCVVGSYCSVPNSPHSFSLDFLSFCYTCKIHLQHTKDIFIYRGEKAFCSQECRNQEMMLDEGEN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1387 254 MobiDBLite consensus disorder prediction 1 27 - -
Psa6g1387 254 ProSiteProfiles Zinc finger FLZ-type profile. 210 254 IPR007650 -
Psa6g1387 254 PANTHER FCS-LIKE ZINC FINGER 8 2 254 IPR044593 -
Psa6g1387 254 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 254 - -
Psa6g1387 254 Pfam zinc-finger of the FCS-type, C2-C2 208 251 IPR007650 -
Psa6g1387 254 MobiDBLite consensus disorder prediction 7 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1387 Psa-Chr6 67059758 67061076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1387 - - mtr:MTR_1g071780 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1387 6 67059758 67061076 Psa6g1387 6 67059758 67061076 ECH
Psa3g1469 3 133993534 133995788 Psa6g1387 6 67059758 67061076 PCT