Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1384 ATGAGAGATGACAACTTGAAGAAAAGCAAGCTTTCATGGCCGAAAACTCTGGTCAAGAAATGGTTCAATATTAAGAGTAAAGCTGAAGACTTTCAAGCTGATGATGTTCTTTATGGAGGTGTTGATGAAGAGTGGAGGAACAACTACTGTTCAAAGAGGGAAGAATGCACTATCAAGAAAAGCAAAACAGAAAGAACAAAGAGACGGCATTCAGAAAGATCGCGGCGATGTAAGGGCGATCACGATGCAGCTCATGTTACCGATGTGAATAACTATAGAATATTTGTTGCAACTTGGAATGTAGCCGGGAGATCTCCTCCGAGTTATTTGAATCTTGAAGATTGGCTTCATACTTCTCCTCCCGCCGATATATATGTTCTTGGGTTTCAAGAAATTGTACCTCTCAATGCTGGAAATGTTTTAGGGACAGAAGACAACGGTCCGGCTAGAAAATGGCTAGCTCTAATTCGGAAGACACTTAACAGTCTTCCTGGAACAAGTGGTGAATGTCACACTAATTCACCGCTGCCTGATCCTGTTGTAGAGTTAGATTCTGATTTTGAAGGATCTATGAGGCAGAAGGAAACCTCTTTCTTCCATCGCAGGTCGTTCCAATCCTCGAGCCGTAGTATGAGAATGGACAATGACATGTTAGTACCCCAAGCGTGCCTTGATCGCCGTTTCAGCGTCTGTGATAGAATGATATTTGGTCATAGTACAGGTGACTATGAGCCCAATTATAGATGGGGTTCCTCGGACGAAGAAAACGGGGAATCTCCGGTTGTAGCACAATATTCACCAATGTCGTATAGAGGGTATGCCTCTACGGAGGATAGAGATAGACAGACAGAGAGCTCGAGATATTGTTTGGTTGCTAGTAAACAAATGGTTGGTATATTTCTAACTGTTTGGGTGAAAAGCAATATAAGAGACGATGTTCGCAACATGAAAGTGTCTTGTGTTGGCAGAGGGTTAATGGGATATCTTGGAAACAAGGGTTCGATATCAATTAGCATGTCTTTGCACAAAACAAGCTTTTGCTTCATATGTAGTCATTTGACTTCGGGACAAAAGGAGGGTGACGAGCTAAGAAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCGAGTTAATGGAATCGGCGACGAGAGTTCTCCTCAGACTATTCTCGATCACGATCGAATAATTTGGCTCGGGGATTTAAACTATCGAATCGCCCTTACTTACCGCGCAGCAAAAGCTCTTGTTGAGATGCATAATTGGAAGGTATTGCTAGAGAATGACCAGCTGCATATAGAGCGGGAACAAGGTCGCGTGTTTGACGGATGGAGTGAAGGGCAAATATACTTTCCCCCGACATACAAATATTCAAACAATTCGGACCGATACGCAGGCGACGAAAGACAATCAAAACAAAAGAGAAGAACGCCAGCATGGTGTGATCGGATCTTATGGCACGGAAGAGGTCTTCACCAATTATCTTATGTTCGCGGGGAGTCAAGATTCTCCGATCATAGACCAGTCTGCAGCGTGTTCTTAGCAGAAGTCGAGTCTGTTAGCCGTAACCGAATCAAAAAATGCTCTAGTTGCACCAGTTCGAGGATCGAAGTAGAAGAGTTGTTGCCTCATTCACACGCCTACAATTACATCGATCTGCCTTTCTATTGA 1680 0.4333 MRDDNLKKSKLSWPKTLVKKWFNIKSKAEDFQADDVLYGGVDEEWRNNYCSKREECTIKKSKTERTKRRHSERSRRCKGDHDAAHVTDVNNYRIFVATWNVAGRSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGECHTNSPLPDPVVELDSDFEGSMRQKETSFFHRRSFQSSSRSMRMDNDMLVPQACLDRRFSVCDRMIFGHSTGDYEPNYRWGSSDEENGESPVVAQYSPMSYRGYASTEDRDRQTESSRYCLVASKQMVGIFLTVWVKSNIRDDVRNMKVSCVGRGLMGYLGNKGSISISMSLHKTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVNGIGDESSPQTILDHDRIIWLGDLNYRIALTYRAAKALVEMHNWKVLLENDQLHIEREQGRVFDGWSEGQIYFPPTYKYSNNSDRYAGDERQSKQKRRTPAWCDRILWHGRGLHQLSYVRGESRFSDHRPVCSVFLAEVESVSRNRIKKCSSCTSSRIEVEELLPHSHAYNYIDLPFY* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1384 559 Pfam Endonuclease/Exonuclease/phosphatase family 97 509 IPR005135 GO:0003824
Psa6g1384 559 Gene3D Endonuclease/exonuclease/phosphatase 73 210 IPR036691 -
Psa6g1384 559 Gene3D Endonuclease/exonuclease/phosphatase 251 544 IPR036691 -
Psa6g1384 559 SMART i5p_5 213 524 IPR000300 GO:0016791|GO:0046856
Psa6g1384 559 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 553 - -
Psa6g1384 559 MobiDBLite consensus disorder prediction 60 79 - -
Psa6g1384 559 SUPERFAMILY DNase I-like 84 536 IPR036691 -
Psa6g1384 559 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 553 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1384 Psa-Chr6 66827648 66831961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1384 284 523 Acyl Lipid Metabolism Gene Families AT1G65580 30.142 2.65e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1384 - - gmx:100797409 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1384 6 66827648 66831961 Psa6g1384 6 66827648 66831961 ECH
Psa3g1463 3 133823457 133826631 Psa6g1384 6 66827648 66831961 PCT