Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1339 ATGCAACATTCAAGCATCGCCGCCGCGTCACAATCTTCTCGCGGCGGCGATTCCGCCGATAGCTCCGACATCAAACGAGCAAAGAAACGTGGTAGTTATAACTGTGGCCGTTGTGGTCTTCCCAAAAAGGGACATAACTGTAATATCAAAACCCCTATCTCCGCCACAACTACTCCGATAGCTCCGACATCAAACGAGCAAAGAAACGTGGGACATAACTGTAATATCAAAACCCCTATCTCCGCCACAACTACGCCTGCCGATTCGTCTCTTTCTGTTGTTTCGGTACCTTCGTCGGCTGTATCGGCGTTTCGTCAGCCACCCTCGAATCTTCGTCGTGCTCTTTCATTCGACGGTCTTGAGGATCGAGCCAGCGGACTCGATCTTTTGCGGTTGGACGATAGGGCAGATGCAGATTCGTTTGTAGAGCCGGATCTGGAATCCGATCTGGATCTGGATGTGGATTTTGACTCGTCCGGGTTGCCGGCGAGTATAAGGTGGGATGTGTTAAGGAGATTGCCACCGGCGGGATTATTATCTGCGGCGAAGGTGTGTAAGGGATGGAGGGAGACGGCAAGGAAGCTGTGGAGAGCGACTGAGGAGTTGAAGCTTAGGGTTCCGGCGAAAGTTCACGTTGGATTCGTAGCGTCGATGCTACAGAAATGTCCTGGGATCGTTAGGCTTTCTCTTAGGATGGAAAGTGATTTTGATTCTACAATGCTGGCTTGCATTGCATTTTCATGCCCCAATCTGGAATCTATGGAGATCTCGATATTTGACACTGCAACCAATCGGATCAATGGGGATGAATTGGGCCGATTTGTTGCGGACAAAAGAAACCTCAAAAGCCTCAAGATGGAAGGTTGTTCTAATCTAGGGGGTTTTGTCATTTGTTCATCTAGTCTGTCTACACTCTGGCTATCAGATCTGCACTCTCTATCTAAGATGGTGTTTAACTGTCCCCAGTTAAGAGAGATTTCATTGGAATTTTCTTGCCAAGAAAATGATAGCACTGATCTGATAACCATGATTGAAGGATTCGGAAGAAGTTGCTTGAAATTGCAAAACATACACATAGCTTCAATGAGGCTTTCTCATACTGCTGTGCTTGCTCTTACAGCTGCTCAATTGAGGGGGCTCCGTATGCTTTCTCTTGTTCTTGGATCTGAATTAACTGATGCATCTGTTGCTGCAATTGCCTCAAGCTACCCAAATCTAGAATTGCTTGACCTCAGTGGATCTGGCATAAGTGACAGTGGCATTGGAATGATTTGTAATGTATTCCCTGAAACACTTAAAAGACTTCTCCTTGCTCTTTGCCCTAATGTGACCTCAAGTGGCATTCAATTTGCTACAGCTCAATTACCTCTTCTTGAACTTATGGACTGTGGCATGACCATATGTGATCCTAATTTCCCAGATCCAACTGCTGATGGAAATGACTGCGAATCACAGAAAACATCCACCACTATGACCATATGTGATCCTAATTTCCCAGATCCAACTGCTGATGGAAATGACTGCGAATCACAGAAAACATCCACCACAAATCTACAACATATAAACCAAAAGCTAATCATCAAACATAGCCGTTTAAAGAAACTCAGTTTGTGGGGTTGCACTGGCTTGGATGCTCTATACTTAAACTGCCCAGAGCTCATTGATCTGAATTTGAATTCTTGTAGAAATCTGATTTCAGAGAGGCTGTTGCTTCAGTGCCCCACTTTAGAAAATGTTCATGCATCAGGTTGTCAGGATATGTTAGTTGGAGCAATTCAAAGTCAGGTCCACAATGCTTTTCCAGCTGTAGATAACCATTCGCCTTCTAAACGTCTACCTGATGGCTCCAAAAGGGTCCGGGTTCCTTATTTACTCAGTGGAGAGTCCCCTGAACCTGATAAAAAGCGAAGGAGGATCGAGAGACTTCCATGTAATGTGCTTGTGGACTAA 1950 0.4533 MQHSSIAAASQSSRGGDSADSSDIKRAKKRGSYNCGRCGLPKKGHNCNIKTPISATTTPIAPTSNEQRNVGHNCNIKTPISATTTPADSSLSVVSVPSSAVSAFRQPPSNLRRALSFDGLEDRASGLDLLRLDDRADADSFVEPDLESDLDLDVDFDSSGLPASIRWDVLRRLPPAGLLSAAKVCKGWRETARKLWRATEELKLRVPAKVHVGFVASMLQKCPGIVRLSLRMESDFDSTMLACIAFSCPNLESMEISIFDTATNRINGDELGRFVADKRNLKSLKMEGCSNLGGFVICSSSLSTLWLSDLHSLSKMVFNCPQLREISLEFSCQENDSTDLITMIEGFGRSCLKLQNIHIASMRLSHTAVLALTAAQLRGLRMLSLVLGSELTDASVAAIASSYPNLELLDLSGSGISDSGIGMICNVFPETLKRLLLALCPNVTSSGIQFATAQLPLLELMDCGMTICDPNFPDPTADGNDCESQKTSTTMTICDPNFPDPTADGNDCESQKTSTTNLQHINQKLIIKHSRLKKLSLWGCTGLDALYLNCPELIDLNLNSCRNLISERLLLQCPTLENVHASGCQDMLVGAIQSQVHNAFPAVDNHSPSKRLPDGSKRVRVPYLLSGESPEPDKKRRRIERLPCNVLVD* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1339 649 Gene3D Ribonuclease Inhibitor 198 489 IPR032675 -
Psa6g1339 649 Gene3D - 153 197 - -
Psa6g1339 649 PANTHER F-BOX/LRR-REPEAT PROTEIN 17-LIKE ISOFORM X1 25 648 - -
Psa6g1339 649 SUPERFAMILY F-box domain 159 198 IPR036047 GO:0005515
Psa6g1339 649 Gene3D Ribonuclease Inhibitor 505 617 IPR032675 -
Psa6g1339 649 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 25 648 - -
Psa6g1339 649 Pfam F-box domain 160 193 IPR001810 GO:0005515
Psa6g1339 649 ProSiteProfiles F-box domain profile. 155 199 IPR001810 GO:0005515
Psa6g1339 649 SUPERFAMILY RNI-like 215 466 - -
Psa6g1339 649 MobiDBLite consensus disorder prediction 1 28 - -
Psa6g1339 649 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1339 Psa-Chr6 60661480 60666044 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1339 - - gmx:100819793 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1339 6 60661480 60666044 Psa6g1339 6 60661480 60666044 ECH