Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1247 ATGACTAATGACAAGGGAGTGGCAAAAGAAGTTGAATGGAGAATCAAAGTTGAAGATGGTCCATGGAAAAGAGCTGGAGTTTCTTGCAACATGTGGACATTCATAACAAGTCTTTATTTCAAGGTGTGCAAATTTTTTAAGAAAGCTTGGGATATTGGTGTGAATGATCCAAGAAAATTCATCCATTGTTTGAAAGTAGGAATAGCACTCACAGCTGTTTCACTTTTCTACTATTTAAAGCCTTTGTATGATGGAGTTGGAAGAAATGCTATGTGGGCCGTCATGACCGTGATCGTCGTCTTCGAATACACGGCCGGTGCAACAATATATAAAAGTATCAACAGAATTTGTGGAACTACCCTAGCTGGACTTTTGGCCTTTGGTGTACATTGGGTTGCTAGTAGAGCAGGAGATCAATGGGAACCTATAATTGTTGGAGTCTCACTCTTTCTATTAGCTTCTACAGCCACATTTTCAAGATTCATACCAACTATTAAAGCTCGTTTTGATTATGGTGCTATGATATTTATCTTAACTTTCTGTTTGGTTTCGGTATCTGGTTATCGGATTGACGAGTTGTTTAATATGGCGCAACAAAGAATTTCTACTATTATAATCGGAACTTCTTTGTGCATCATCGTTAGCACGACGGTTCGGCCCGTTTGGGCTGGTCTAGAACTCTATGTTTTAGTCACCGAAAACCTCGACAAACTCGCTAACTCCTTGCAAGGTTGTGTGGCTCAGTACTTTGAAGCACAAACTGCAAGTGAGGAGTCTAACAAAAAGATGATGGGTTATAAATGTGTGCTAAACTCTAAAGCAACAGAAGAATCATTGGCCAACTTAGCTAGATGGGAGCCTGCACATGGAAGATTCAATTTCCGTCATCCATGGAAACAATATCTTAAAATCGGAGCAACAATGCGTAGATGCGCTTCTTGCATTGATGCTCTTATTGGATGCATACATTCAGAAAACAAGAGCTCAAATGACATAAGGAAGATTATGAGCAAAACCTCTATACAAGTGGGAGACATCTCTGCAAATGTTTTGAGAGAGTTAGCAATAACAATAACAAGTATGACAAAATCTAACAAACTTGATATTTTGGTCATAGAGATGAACAGTGCAGCACAAGAGCTACAAAATTTATTAAAATCATATCCAAACACACAAAAGAATGATGATGCAAAAATGGAAATTCCAATAATGGATATTATTCAAGTGGTCACCATGGTTTCCTTGTTGACTGAAATCGTAGCACGTGTGGAAGACATTGTGAACTGTGTTGAAGAACTATCAAATTTAGGTAAATATAAACCAGCAATGTCCAAGTGTGACAAATCTAAACAACACTCTACAGATAGCAAGATCTCTCCAGAACAACAAAATGAAGAGGAAGCAATAGTGAAAACACTTCAAGTGGTATGA 1431 0.3809 MTNDKGVAKEVEWRIKVEDGPWKRAGVSCNMWTFITSLYFKVCKFFKKAWDIGVNDPRKFIHCLKVGIALTAVSLFYYLKPLYDGVGRNAMWAVMTVIVVFEYTAGATIYKSINRICGTTLAGLLAFGVHWVASRAGDQWEPIIVGVSLFLLASTATFSRFIPTIKARFDYGAMIFILTFCLVSVSGYRIDELFNMAQQRISTIIIGTSLCIIVSTTVRPVWAGLELYVLVTENLDKLANSLQGCVAQYFEAQTASEESNKKMMGYKCVLNSKATEESLANLARWEPAHGRFNFRHPWKQYLKIGATMRRCASCIDALIGCIHSENKSSNDIRKIMSKTSIQVGDISANVLRELAITITSMTKSNKLDILVIEMNSAAQELQNLLKSYPNTQKNDDAKMEIPIMDIIQVVTMVSLLTEIVARVEDIVNCVEELSNLGKYKPAMSKCDKSKQHSTDSKISPEQQNEEEAIVKTLQVV* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1247 476 MobiDBLite consensus disorder prediction 444 465 - -
Psa6g1247 476 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 5 463 - -
Psa6g1247 476 Pfam Aluminium activated malate transporter 50 434 IPR020966 GO:0015743
Psa6g1247 476 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 5 463 - -
Psa6g1247 476 MobiDBLite consensus disorder prediction 444 464 - -
Psa6g1247 476 Coils Coil 367 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1247 Psa-Chr6 52976411 52978706 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1247 8 460 Miscellaneous Gene Families AT4G00910 48.340 1.51e-164 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1247 - - gmx:100783168 645.966