Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1225 ATGCAAATGACTAGTGTAATGGGAAAAAGTAGAATCATCTTAACAATGAGTGCAAGGTTCATCAACGAAGCAATAAGTTTCCTAGTCTTTTGCTTCCTTGACCTAGTTGATTTTCTTCTATGTTTTCTCTTTAAATCGGTCGACATGCTATTCGACTCCGAGTTTAGACCGTGTTATTGTTCTTCTTCGGCTAAGGAAGCAATAACAAGTGGTGGAAAAATCTTGGTTTCTGAACAAGGAGGTGAATCGAAAATCGTTTCGCTTAGTTCGACTAAGTTAATGTTAGAGGATATATCCGACACGCTTTATTCTCGTCCTTCGCTGGTTTCTGAGGTTTCGAGGCTAACCATGAATGAACTTAAAAGATTGAAATTGGAAGATCCTATTCTTGCTCAATCTAAGAGAGGAAACTCACGTTGTTCTAGCTTTACAGTGAATACTACTATCGTTGAAATGCTTCAAGGTAAAATTGGAAAACATGATGTTCATAATCAAATACCTAGATGGTCAGATTGTGATTGTAAAGAATGCTGCTCTTGGATTCAACCTTCTAGTAAAACCACTCTCTATGTTAAGTCTCAATTTCCAACCTCAGGTGAGTCGAGAGAAGATGTGTTGTTTATACATGGATTCATATCATCATCCCTATTTTGGACAGAAACATTGTTCCCAAATTTTTCAAGTGAAGCAAACTCAAAGTATAGGTTATTTGCAGTTGATTTGCTAGGTTTTGGGAAGAGTCCTAAGCCAAGTGAATCACTCTACACATTAAGGGAACATTTAGATATGATAGAGAAATCTGTTTTGGAGGCCCATAAAGTTGAATCTTTCCACATAGTGGCCCATTCGTTGGGATCAATTTTAGCCCTAGCACTTGCAGCTAAATATCCTCAATATGTCAAGTCCATAACTTTGCTTGCCCCACCCTACTATCCTGTACCTAAGGGTGAAGCGCAAGCGACGCAATATGTGATGAGACAAATCGCGCCGAGGCGCGTTTGGCCACCGATGGCGTTTGGAGCGTCGCTCGTGTGTTGGTATGAACATATAACTAGGATGATCTGTTTCCTCATTTGTAAGAATCATCGTTTGTGGATATTTCTCACCAGACTCATCACTCGTAACAGGGTAAGGACTTTCTTGCTTGAAGGATTCTTTAGTCACACCCATAATGCAGCTTGGCATACACTACACAATATTATATGTGGAACAGCTGCAAAACTTGGAACATATTTGGAAACAGTGAATGAAAATCGAAATTGCAAAGTTACTATATTTCATGGCAAGAATGATGAGGTTATACCTATTGAGTGTAGCTATGATGTAGTGAAAATGATTCCAAGTGCAGAGCTTAGAGTTATTGATGATAAAGATCATATAACTATTGTTGTTGGAAGACAGAAAGATTTTGCTAGAGAATTGGAAGAGATTTGGAATTCTACAAACAAGAGCTAG 1455 0.3849 MQMTSVMGKSRIILTMSARFINEAISFLVFCFLDLVDFLLCFLFKSVDMLFDSEFRPCYCSSSAKEAITSGGKILVSEQGGESKIVSLSSTKLMLEDISDTLYSRPSLVSEVSRLTMNELKRLKLEDPILAQSKRGNSRCSSFTVNTTIVEMLQGKIGKHDVHNQIPRWSDCDCKECCSWIQPSSKTTLYVKSQFPTSGESREDVLFIHGFISSSLFWTETLFPNFSSEANSKYRLFAVDLLGFGKSPKPSESLYTLREHLDMIEKSVLEAHKVESFHIVAHSLGSILALALAAKYPQYVKSITLLAPPYYPVPKGEAQATQYVMRQIAPRRVWPPMAFGASLVCWYEHITRMICFLICKNHRLWIFLTRLITRNRVRTFLLEGFFSHTHNAAWHTLHNIICGTAAKLGTYLETVNENRNCKVTIFHGKNDEVIPIECSYDVVKMIPSAELRVIDDKDHITIVVGRQKDFARELEEIWNSTNKS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1225 484 PANTHER HYDROLASE 8 481 - -
Psa6g1225 484 Pfam alpha/beta hydrolase fold 205 312 IPR000073 -
Psa6g1225 484 PANTHER LYSOPHOSPHOLIPASE BODYGUARD 3-RELATED 8 481 - -
Psa6g1225 484 SUPERFAMILY alpha/beta-Hydrolases 198 476 IPR029058 -
Psa6g1225 484 PRINTS Alpha/beta hydrolase fold signature 233 248 IPR000073 -
Psa6g1225 484 PRINTS Alpha/beta hydrolase fold signature 279 292 IPR000073 -
Psa6g1225 484 PRINTS Alpha/beta hydrolase fold signature 293 306 IPR000073 -
Psa6g1225 484 Gene3D alpha/beta hydrolase 181 483 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1225 Psa-Chr6 50974249 50977304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1225 18 478 Acyl Lipid Metabolism Gene Families AT1G64670 55.460 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1225 - - gmx:100811400 760.37