Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1124 ATGACCACTATCACTAACTTTTCCCTTCTATTCATATTCATATTCATATTCCTCTCTCAAACTACATCTCTCTCAAAAGCATGCCATCCACAAGATGAAACCATCCTTCTCCAAATCAAAAAAGAATTCAACAATCCATCTCTTCTCTCCTCATGGATACCACACACTGATTGCTGTAACTTTAAGTGGTCCGGCGTTGCTTGCTCCTCCTTAACCAACGATCGCGTCACCGATCTAAGTATCTCCAACAACATTCACATTACTTCTCATTTTCCTCCATCTATTGATAACCTACCTTACTTAGAGACCTTATTTATCTATAATTTACCAAATCTCACTGGCCCAATTCCACAATCCATCATCAAACTCACCAACCTTCGATACCTTACAATCAGTAAAACCGGTGTAATAGGTCCAATACCTAAATTTACGTACAAATCCAAAAACCTAGTTGAGTTGGATCTATCACACAATAACATCATTGGAACACTCCCTCCTTCACTATATAAATTGCCAAGTCTTTCAGGGATTCTCTTTAACAATAACAACTTAAGAGGCTCGATCCCGACTTCATATGGTTACTTCAATAACAGCCATGTTTCTACTTTAGATCTCTCTTACAATAAACTCTCGGGGAAACTCCCGATTTCATTGTCCAAGTTAGATATTTACCTTGTTGAATTGGCTTATAATAAGTTTGAAGGTGACGCTTCTATGCTTTTCGGTTCCAATAAAAAGACATTGGTGATAGACATTTCGGGGAACCGTTTTGCTTTTGATTTTGGAAGAGTTGAGTTGTCTCAAACCATAGCAACGTTGGATGTGAGTCACAATAAGATCTATGGTAGTTTTCCTATGGCAATGGAAAATGTAACATTTTTGAATGTGAGCTATAATAGGCTATGTGGTGAGATTCCAAAGGTTGGATATTTCAACACTTTTGATGTGTCTTCATTTGTTCATAACAAGTGTTTGTGTGGCTCTCCTCTTCCAAGCTGCAACTGA 1005 0.3781 MTTITNFSLLFIFIFIFLSQTTSLSKACHPQDETILLQIKKEFNNPSLLSSWIPHTDCCNFKWSGVACSSLTNDRVTDLSISNNIHITSHFPPSIDNLPYLETLFIYNLPNLTGPIPQSIIKLTNLRYLTISKTGVIGPIPKFTYKSKNLVELDLSHNNIIGTLPPSLYKLPSLSGILFNNNNLRGSIPTSYGYFNNSHVSTLDLSYNKLSGKLPISLSKLDIYLVELAYNKFEGDASMLFGSNKKTLVIDISGNRFAFDFGRVELSQTIATLDVSHNKIYGSFPMAMENVTFLNVSYNRLCGEIPKVGYFNTFDVSSFVHNKCLCGSPLPSCN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1124 334 Pfam Leucine Rich repeat 196 212 IPR001611 GO:0005515
Psa6g1124 334 Pfam Leucine Rich Repeat 149 171 IPR001611 GO:0005515
Psa6g1124 334 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Psa6g1124 334 PANTHER POLYGALACTURONASE INHIBITOR 1 8 333 - -
Psa6g1124 334 SUPERFAMILY L domain-like 27 332 - -
Psa6g1124 334 Gene3D Ribonuclease Inhibitor 27 334 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1124 Psa-Chr6 43682510 43683514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1124 119 334 Receptor kinase-like Gene Family AT1G62950 30.081 6.55e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1124 - - ccaj:109801847 377.481