Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1103 ATGGGTTGGAAAGCAGCTGAGAAACTGATTAGGCATTGGAAAGTTGTCAGAGGGGATAATGTTATGATTACAAGGGGCAAAGATAAGGGCGAGACCGGAGTTATTAAGCGCGTTGTTCGCTCTCAGAATCGTGTTATTGTTGAGGCAAAATCTGGTAAGAAGCATATCAGCAAGGACAAGGTCATGAAGGGGTATCTTACCGTTGAAGCCCACTTCATGCCTCCAATGTGCAAGAAGCCTTGCAAGGTTGGAACTAAGTATCTTGAAGATGGTACCAAAGTCAGAGTGTCCAGGGGAATAGGAGCTTCTGGCTCCATTATTCCTCGTCCTGAGATCTTAAAGATTAGAACTACACCAAGACCTTCCGTCGCTGGTCCCAAGGACACTCCAATGGAACATGTGTATGAGAAGACATACGATGCTAAAACAGGAAGGGGCATGCCTGAACTTTAA 453 0.4547 MGWKAAEKLIRHWKVVRGDNVMITRGKDKGETGVIKRVVRSQNRVIVEAKSGKKHISKDKVMKGYLTVEAHFMPPMCKKPCKVGTKYLEDGTKVRVSRGIGASGSIIPRPEILKIRTTPRPSVAGPKDTPMEHVYEKTYDAKTGRGMPEL* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1103 150 SMART kow_9 14 41 IPR005824 -
Psa6g1103 150 SUPERFAMILY Translation proteins SH3-like domain 10 99 IPR008991 -
Psa6g1103 150 Pfam KOW motif 17 48 IPR005824 -
Psa6g1103 150 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 1 142 IPR003256 GO:0003735|GO:0005840|GO:0006412
Psa6g1103 150 PANTHER 39S RIBOSOMAL PROTEIN L24, MITOCHONDRIAL 1 142 - -
Psa6g1103 150 Gene3D - 4 102 IPR014722 -
Psa6g1103 150 CDD KOW_RPL26 18 70 IPR041988 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1103 Psa-Chr6 42753925 42756599 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1103 K02895 - gmx:100305917 229.95