Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1086 ATGGGTTGGAAAGCAGCTGAGAAACTGATTAGGCATTGGAAACTTGTCAGAGGGGATAATGTTATGATTACAAGGGGCAAAGATAAGGGCGAGACCGGAGTTATTAAGCGCGTTGTTCGCTCTCAGAATCGTGTTATTGTTGAAGGCAAAAAATCTGTAAAGAAGCATATCAAGCAAGGACAAGGTCATGAAGGGGTATCTTTACCGTTGAAGCCCCACTTCATGCCTCCAATGTGCAAGTTCTTGATCCAGTCACAGGGAAGCCTTGCAAGGTTGGAACTAAGTATCTTGAAGATGGTACCAAAGTCAGAGTGTCCAGGGGAATAG 327 0.4465 MGWKAAEKLIRHWKLVRGDNVMITRGKDKGETGVIKRVVRSQNRVIVEGKKSVKKHIKQGQGHEGVSLPLKPHFMPPMCKFLIQSQGSLARLELSILKMVPKSECPGE* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1086 108 CDD KOW_RPL26 18 64 IPR041988 GO:0003723
Psa6g1086 108 SUPERFAMILY Translation proteins SH3-like domain 10 63 IPR008991 -
Psa6g1086 108 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 1 66 IPR003256 GO:0003735|GO:0005840|GO:0006412
Psa6g1086 108 SMART kow_9 14 41 IPR005824 -
Psa6g1086 108 Pfam KOW motif 17 48 IPR005824 -
Psa6g1086 108 Gene3D - 4 76 IPR014722 -
Psa6g1086 108 PANTHER 39S RIBOSOMAL PROTEIN L24, MITOCHONDRIAL 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1086 Psa-Chr6 42170336 42170921 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1086 K02895 - zju:107425958 129.028