Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1049 ATGGCAACCTCATCTTCTCTCACAAACAACCAAGATGAAAATGTTCTGCAAAAACACGTTGCATTCTTCGATCGAAACCATGACGGTATCGTTTATCCATGGGAAACATTCCAAGGATTTCGAGCAATAGGTTGTGGAATTTTGTTATCGTCAGTTGCTTGTATTTTCATAAATTTGGGTCTCAGCCAGAAAACTCGTCCGGGAAAATTTCCTTCTATATTTCTACCAATAGAAATAAAAAATATTGAGAAAGCAAAACATGGAAGTGACTCTGGTGTGTATGATAGCCAAGGAAGGTTTGTTCCTTCAAAATTTGAAGAGATTTTCATCAAGCATGCAAAAAAGAATCCAGATGCTTTAACATCTGATGAATTGATGGGGTTGTTAAAGTCAAATAGAGAGCCTAAGGATTACAAAGGATGGTTTGCTAGCTACACAGAATGGAAAATTTTATATGTTCTTTGCAAAGATAAGAATGGTTTGCTTCACAAGGAAACAGTTCGTGCTGTTTATGATGGAAGCTTGTTTGAACAAATGGAAAAGGAACATTCAGAAAAGAAAAACAAATAA 570 0.3561 MATSSSLTNNQDENVLQKHVAFFDRNHDGIVYPWETFQGFRAIGCGILLSSVACIFINLGLSQKTRPGKFPSIFLPIEIKNIEKAKHGSDSGVYDSQGRFVPSKFEEIFIKHAKKNPDALTSDELMGLLKSNREPKDYKGWFASYTEWKILYVLCKDKNGLLHKETVRAVYDGSLFEQMEKEHSEKKNK* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1049 189 PANTHER PEROXYGENASE 3-RELATED 8 188 IPR007736 -
Psa6g1049 189 SUPERFAMILY EF-hand 11 165 IPR011992 -
Psa6g1049 189 Pfam Caleosin related protein 12 179 IPR007736 -
Psa6g1049 189 PANTHER INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED 8 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1049 Psa-Chr6 40347875 40350130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1049 11 189 Acyl Lipid Metabolism Gene Families AT1G70670 72.067 2.83e-95 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1049 K17991 - cit:102625577 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1049 6 40347875 40350130 Psa6g1049 6 40347875 40350130 ECH