Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1042 ATGGATCAATCTCAGAATCAGCGATCACTAACAACGCCGCCACCACCATCGCGTTCTGTCCAATTCCACCCTGCTCGAGTACCGATTCTCGATCTCTTCACTCTCTACTTAGGACTTGGAAGAAACAGCCGCAACAAACCCGACGACTCACTCCGCGAACCACCGAACAAAACGCAAAAACGGGTGCATGCTATTAACAGAGAGCTTCCGCCGCCGAATGAGCAATTCATTTTAGATTTTGAGCAACTTCAGAGCCAGTTTCCGGACCATGAGCAATTACGTTTTGTGGCTGAAGCTGTTCTTATACCATTGGTTGCACAATGTAGTGGTCATGGATCGCGATCAGACTTTCTTATTTTTATTTTGCGAAGCTTGAGTGGTATTGGGTGCATTAACTGGGACACCTTTCTTCCTTCCCTTCTTTCTTCAGTTTCTTCGGCAGAATTACCGGTTGGTCAAATGAGTCAAGCAGTGCCAACAGTTACCTCTTCTAGCTTGTCACAGTCGGGAATGCTGCCTCCAAACACAATTACTAATTCTTCTAATTTTCAGTCTTCAAATCCTGCATCTCCATTGAATTCTGTCCACACTATTGGCTCCCCCGCACAGTCATCGATGGAGCCGTTATCTGGTGCAGCTCTATCTCCTGTAAAATCATCTGATATTTCCTCGAGTGGATTACAGTTTAAACTAAGAGGCAGCCCGTCTGTTAGAAATAATGATATCAGTAACAGTAGCCTTCGCCAGCTATGTTGCAAAATCATTTTAACTGGTCTGGAATTCAGTTTAAAACCTGTGACATATGCCGAAATCTTCAACCATATGCTGAATTGGCTGGTGAATTGGGACCAGAGACAACATGGAGTTGATGAATCTGATATTATTAAGTCATGGAGACTTGACAAAACCGTAATAGCTTGGCTACATAGTTGCTTGGATGTGATCTGGCTTTTAGTTGACGAGGGAAAATGTCGGGTTCCCTTTTATGAATTATTACGGAGTGATTTTCAATTCATAGAAAATATACCCGATGATGAAGCATTATTTACACTTATCTTGGAGATCCACAGGAGACGAGATATGATGGCTCTGCACATGCAAATGTTAGACCAGCATCTTCATTGCCCTACATTTGGGACTCATCGAATCCTAAACCAGACCACACCTACTATTTCAAGCGAAGCAGTAGCACACCTGCGACTATCACCACTGTCATATTTAAGTGTACTTGGAGAACCATTGCACGGAGAGGATATTACAACCTCTATTCAGAAGGGAAGTTTGGACTGGGAGAGAGCTGTACGTTGCATCAGGCATGCTCTCCGTACCACACCTTCACCTGATTGGTGGAGACGGGTACTGGTACTGGCTCCTTGCTACAGGCCTTCATCTCAAGGAATTACTGCTGGTGCTGTTTTTTCTTCAGAGATGATTTGTGAGGCAGTTATTGATAGAATTGTAGAACTATCCAAATTAACAAATTCAGAGATAAATTGCTGGCAGGACTGGCTTGTCTTCTCTGATATTTTTTATTTTCTTACGAAAAGTGGGTGCATTGATTTTATTGACTTTGTGGACAAGCTGGTGTCACGTCTTTCCGAGGGTGATCATCATATACTTAGGACAAATCACGTGACTTGGCTGCTTGCACAGATAATACGAATTGAGCTGGTCATGAATGCTTTGAATTCAGATTCTAGAAAGGTGGAAACAACCAGAAAGGTTTTATCATTTCATAGAGAAGACAGAAGTTCGGATCCCAATAGTCCTCAAAGTATCTTGCTTGATTTTGTAAGCAGTTGTCAAAATTTACGTATATGGTCATTAAACACATCAACCAGAGAGTACCTGAATAATGAACAACTTCAAAAAGGAAAGCAAATAGATGAATGGTGGAGACAAGCAAGCAAAGACCGAATGATGGACTATATGAATATGGACGAACGCTCAATAGGAATGTTTTGGGTTGTGACCTACACAATGGCACAGCCTGCTCTTGAAACAGTAATGAATTGGTTAACTTCTCCTGGAGTTATAGACTTATTACCTACAACAAATCTACAACCAGCTGAGAGATTAGTTTGTACACGAGAAGTGAGCCCAATACCTATATCATTGTTATCGGGGTTTTCATTGAACTTATGTTTGAAGCTGTCTTATCAAATGGAAGATTCTCTATTTTCTGGGCAGGTTATACCCAGCATTGCCATGGTTGAAACTTATACCAGATTGCTGCTTATTGCACCTCATTCACTATTCCGTTCGCATTTCAATCATCTGGTGCAAAAAAATCCTTCTTTGTTGAGCAAGCCTGGTGTAACACTTTTGGTTCTTGAGATATTGAACTACCGACTACTTCCACTTTACAGGTATCAGGGAAAAAGCAAAGCCTTGATGTATGACGTGACAAAGATAATTTCTGCTCTAAAAGGAAAACGGGGAGATCACCGTGTATTTAGATTAGCTGAAAATCTGTGCCTGAATCTGATATTCTCATTGAGAGATTTCTTTTTGGTTAAAAGGGAAGGAAAGGGCCCAACAGAATTTACGGAAACTTTGAACCGAGTGACGGTTATAACACTGGCTATACTAATTAAGACCCGCGGGATTGCCGATGCTGATCACCTGCTTTATCTCCAAAACATGTTGGATCAAATAATGGCAGTCAGCGTACATACATGGTCAGAAAAAACACTCCGATACTTCCCGTCTGTTATGCGTGAAGCATTGAGTGGTCGACCAGATAAAAGAAGCCATGCAATCCAAACATGGCAACAGGCAGAAACTACCGTTATACACCAGTGCACCCAGCTTCTTTCACCTTTGGCAGATCCTAGTTATGTTATGACCTATATCAGCCATAGTTTCCCTCAGCATAGACAGTATTTGTGTGCTGGTGCATTGATATTAATGCACGGCCATGCAGAAAACATTAACAGTGGAAACCTGGGACGCGTACTGCGGGAATTTTCTCCCGAAGAAGTGACATCCAACATTTACACCATGGTTGATGTTATGCTTCATCATATGCAAATAGAGCTTCAACAAGGACACTTGATACAGGACCTTATGTTAAAAGCGTGTGCAAGCCTTGCCTTTTTTGTTTGGACAAATGAGTTACTTCCCTTGGATATCTTGCTTCTTGCACTTACTGATCGTGACGATGATCCACATGCTTTGCGTATTGTGATCAGTTTGCTTGATAGGCAAGAGCTTCAGCAGAGAGTTAAACTCTTTTGTTTAACTCGTGGACCCCCTGAACATTGGCTTCACACAGGTGTATTCAAGCGGGTTGAGCTACAAAAGGCCCTTGGAAATCATCTTTCGTGGAAGGATAGGTATCCCGTGTTCTTTGATGATATTGCAGCACGCTTGCTTCCAATCCTTCCCTTAATTATTTACAGACTTATTGAGAATGATGCAATGGATACAGCAGAAAGACTACTGGCTCTATATTCTCAATTGCTTGCTTATTACCCTCTAAGATTTACATTTGTTCGTGATATACTTGCATATTTCTATGGTCATCTTCCTGGAAAACTCATTGTTCGAATACTCAATGTACTTGACATCAGTAAGATTCCCTTTTCAGAGTCATTCCCACAGCAAATAAGTTCGTCAAATCCTGCCATGTGCCCTCCTCTGGACTATTTTACTACTCTATTGTTGGGAATAGTAAATAATGTAATTCCTCCATTACATAACAATTCAAAATCTGTAAGCATAGGAGATGCATCAAACAGTGCACTGCGTACTGCCCAAAACAAACCGCCGGCAGTATCTCAGTCTGGACTACCAAATGCTTCTGAGGGCCAAAAGGCATTCTACCAAATTCAGGATCCTGGCACATATACTCAGCTGGTTCTTGAGACTGCTGTCATTGAAATACTGTCCCTTCCTGTGTCTGCTTCTCAGATAGTACAGTCACTTGTTCAGATTGTTGTTAATATACAACCAACATTGATCCAGTCCAGCGATTCTCTCCACGGTTCCTCAAATGGTGTAGGGCAAGGTTCAGTGTTGCCAACATCACCTTCAGGGGGAAGCACAGACTCCTTAGGTGGAAGTAGATCAACTCCTTCAGCTTCCGGAGTAAATACCACTAACTTTGCTTCACGAAGTGGTTATACAAGTCAACAACTGTCTTGCTTGTTGATTCAAGCTTGTGGCCTCCTTCTGGCTCAACTTCCTCCTGATTTTCATGCACAACTTTACTTGGAGACGACACGTATAATAAAAGAGAACTGGTGGCTTACAGATATGAAAAGGTCACTTGTAGAAATAGACTCTGCTGTTGGCTATGCTTTGTTAGATCCAACATGGGCTGCACAGAACAATACCTCCACGGCCATCGGGAATGTGGTTGCCTTACTTCATTCTTTCTTTAGTAACCTACCTCAAGAATGGCTTGAAGGGAGTAATGTTATCATCAAGCAACTTCGGCCAGTAACTTCAATTGCAATGTTGAGGATAGCATTCCGTATAATCGGCCCACTCCTTCCAAAACTTGCCAATACTCATACACTTTTCATTAAGACCCTATCCTTACTGTTAAGTATATTGGTGGATGTATTTGGAAAGAACTCCCAGATATCAATTGCTGCTGATGCATCAGAGATAGCAGATATCATTGACTTCCTTCATCATGTCATTCACTATGAAGGGCAGGGAGGGCCTGTGCAGGCTAGCAGCAAGCCTCGACCAGATGTTTTGGCTCTCATTGGAAGGGCGGCAGAGAGTTTACGACCAGACATTCAACATCTTCTCTCACACTTAAATACTGATGTGAATTCTTCTGTTTATGCTGCATCTCATCCAAAGTTAGTCCCAAATCCAACTTAG 4842 0.4205 MDQSQNQRSLTTPPPPSRSVQFHPARVPILDLFTLYLGLGRNSRNKPDDSLREPPNKTQKRVHAINRELPPPNEQFILDFEQLQSQFPDHEQLRFVAEAVLIPLVAQCSGHGSRSDFLIFILRSLSGIGCINWDTFLPSLLSSVSSAELPVGQMSQAVPTVTSSSLSQSGMLPPNTITNSSNFQSSNPASPLNSVHTIGSPAQSSMEPLSGAALSPVKSSDISSSGLQFKLRGSPSVRNNDISNSSLRQLCCKIILTGLEFSLKPVTYAEIFNHMLNWLVNWDQRQHGVDESDIIKSWRLDKTVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDFQFIENIPDDEALFTLILEIHRRRDMMALHMQMLDQHLHCPTFGTHRILNQTTPTISSEAVAHLRLSPLSYLSVLGEPLHGEDITTSIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPCYRPSSQGITAGAVFSSEMICEAVIDRIVELSKLTNSEINCWQDWLVFSDIFYFLTKSGCIDFIDFVDKLVSRLSEGDHHILRTNHVTWLLAQIIRIELVMNALNSDSRKVETTRKVLSFHREDRSSDPNSPQSILLDFVSSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQASKDRMMDYMNMDERSIGMFWVVTYTMAQPALETVMNWLTSPGVIDLLPTTNLQPAERLVCTREVSPIPISLLSGFSLNLCLKLSYQMEDSLFSGQVIPSIAMVETYTRLLLIAPHSLFRSHFNHLVQKNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCLNLIFSLRDFFLVKREGKGPTEFTETLNRVTVITLAILIKTRGIADADHLLYLQNMLDQIMAVSVHTWSEKTLRYFPSVMREALSGRPDKRSHAIQTWQQAETTVIHQCTQLLSPLADPSYVMTYISHSFPQHRQYLCAGALILMHGHAENINSGNLGRVLREFSPEEVTSNIYTMVDVMLHHMQIELQQGHLIQDLMLKACASLAFFVWTNELLPLDILLLALTDRDDDPHALRIVISLLDRQELQQRVKLFCLTRGPPEHWLHTGVFKRVELQKALGNHLSWKDRYPVFFDDIAARLLPILPLIIYRLIENDAMDTAERLLALYSQLLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNVLDISKIPFSESFPQQISSSNPAMCPPLDYFTTLLLGIVNNVIPPLHNNSKSVSIGDASNSALRTAQNKPPAVSQSGLPNASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSASQIVQSLVQIVVNIQPTLIQSSDSLHGSSNGVGQGSVLPTSPSGGSTDSLGGSRSTPSASGVNTTNFASRSGYTSQQLSCLLIQACGLLLAQLPPDFHAQLYLETTRIIKENWWLTDMKRSLVEIDSAVGYALLDPTWAAQNNTSTAIGNVVALLHSFFSNLPQEWLEGSNVIIKQLRPVTSIAMLRIAFRIIGPLLPKLANTHTLFIKTLSLLLSILVDVFGKNSQISIAADASEIADIIDFLHHVIHYEGQGGPVQASSKPRPDVLALIGRAAESLRPDIQHLLSHLNTDVNSSVYAASHPKLVPNPT* 1614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1042 1613 MobiDBLite consensus disorder prediction 1 16 - -
Psa6g1042 1613 Pfam Mediator complex subunit 23 496 1179 IPR021629 -
Psa6g1042 1613 PANTHER BNAA09G30010D PROTEIN 1 167 - -
Psa6g1042 1613 PANTHER BNAA09G30010D PROTEIN 227 1606 - -
Psa6g1042 1613 MobiDBLite consensus disorder prediction 1344 1364 - -
Psa6g1042 1613 MobiDBLite consensus disorder prediction 1 21 - -
Psa6g1042 1613 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 227 1606 IPR021629 -
Psa6g1042 1613 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 1 167 IPR021629 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1042 Psa-Chr6 40118823 40146343 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1042 K15166 - gmx:100798789 2863.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1042 6 40118823 40146343 Psa6g1042 6 40118823 40146343 ECH