Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1039 ATGTCTCTTACTTTGCAGAAACACGCCTTCCAATGTGCACGTGACCATCTTGATTCTAAGCCATCCAAGAAGATTGACAGTAAACATCTGGCATTGGCCCTTAAGAAGGAGTTTGATTCTTCATATGGACCAGCTTGGCACTGCATTGTAGGAACTAGCTTTGGTTCCTATGTTACACATTCTGTTGGTGGTTTTTTGTACTTCTCCATTGATAAGGTTCATGTCCTTCTCTTCAAGACAGCTGTTGCACCATTGAACCATTCATAA 267 0.4157 MSLTLQKHAFQCARDHLDSKPSKKIDSKHLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVHVLLFKTAVAPLNHS* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1039 88 Pfam Dynein light chain type 1 1 80 IPR001372 GO:0007017|GO:0030286
Psa6g1039 88 PANTHER DYNEIN LIGHT CHAIN 1 86 IPR001372 GO:0007017|GO:0030286
Psa6g1039 88 PANTHER DYNEIN LIGHT CHAIN 1 86 - -
Psa6g1039 88 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 1 81 IPR037177 GO:0007017|GO:0030286
Psa6g1039 88 SMART Dynein_light_2 1 80 IPR001372 GO:0007017|GO:0030286
Psa6g1039 88 SUPERFAMILY DLC 1 80 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1039 Psa-Chr6 40092795 40093424 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1039 K10418 - gmx:100305536 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1039 6 40092795 40093424 Psa6g1039 6 40092795 40093424 ECH