Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g1010 ATGCACCCTTACAACCGGCTACCGTCCAGTGGCCATTCATCGCCGTCTCCTCCTGCCTCACCTCTCCGTTCACCTCGTCTCCGTCACACCCGTTCCAAAACCGGCCGGTTCTCTCCGTCCCAACCCGCTCCACGAACCTATGCTCAACGCCTCGCTTGGATTTTCCTCTCGGTTCTCCTTCGTCGCCAAGGCATTTTTCTCTTTGCGCCTCTAATCTATATCTCCGGCATGCTTCTCTACTTCGGAACCTTCTCATTCGACGTCGTTCCTATCATTAAGCACCGTCCTGCTCCGGGTTCTCTCTACCGTAGTCCTCAACTCTATGCTAAGCTTCAACAGGAAATGGATGCAGATAATTCTTCAGCCGATGCGATATCAACAATATGGAAGAGTCCATATAGAGGTGGTGAATGGAAACCATGCGTACACAGATCTTCAGAAGGCCTTCCTGAATCAAATGGATACATTTATGTAGAGGCTAATGGTGGCTTAAATCAGCAAAGGACATCTATATGCAATGCTGTTGCTGTGGCTGGCTATCTTAACGCTACTCTTGTGATCCCAAATTTCCATTATCATAGCATATGGAAGGATCCTAGCAAGTTCAGCGACATTTATGATGAAGAATATTTTGGCAATATCTTGAAAAATGATGTACGGGTGGTTGAAAAGATTCCCGAGCACATGTTGGAAAGATTTGGCAGCAACATGACAAATGTTTTCAATTTTAGGATCAAGGCATGGTCATCCATTCAGTATTACAGAGACGTGGTACTCCCAAAGTTACTTGAAGAACGGGTTATAAGGATTTCACCTTTTGCAAATAGATTATCATTTGATGCTCCTCCAGCTGTCCAGCGTCTTAGATGCTTAGCAAATTATGAGGCTTTACGATTTTCAAGTCCCATATTGTCCCTGAGTGAATCTTTGGTTGCAAGAATGAGGAAGCAAAGCATAGTGAATGGTGGTAAATATGTCTCCATACATCTTCGTTTTGAAGAGGATATGGTTGCTTTCTCTTGTTGTGTTTTTGATGGCGGGAAACAGGAGAGAGACGACATGGTTGCAGCAAGAGAGAGAGGTTGGAAAGGGAAGTTTACAAAACCTGGACGAGTTATACGTCCTGGAGCAATCAGGATCAACGGGAAGTGTCCCCTCACTCCATTAGAGGTATTATCTTCTCAAATCTTCAGTTATCTTGGTCTGTACGAAGTGTGTTAA 1221 0.4464 MHPYNRLPSSGHSSPSPPASPLRSPRLRHTRSKTGRFSPSQPAPRTYAQRLAWIFLSVLLRRQGIFLFAPLIYISGMLLYFGTFSFDVVPIIKHRPAPGSLYRSPQLYAKLQQEMDADNSSADAISTIWKSPYRGGEWKPCVHRSSEGLPESNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLVIPNFHYHSIWKDPSKFSDIYDEEYFGNILKNDVRVVEKIPEHMLERFGSNMTNVFNFRIKAWSSIQYYRDVVLPKLLEERVIRISPFANRLSFDAPPAVQRLRCLANYEALRFSSPILSLSESLVARMRKQSIVNGGKYVSIHLRFEEDMVAFSCCVFDGGKQERDDMVAARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVLSSQIFSYLGLYEVC* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g1010 406 MobiDBLite consensus disorder prediction 1 43 - -
Psa6g1010 406 Pfam GDP-fucose protein O-fucosyltransferase 155 390 IPR019378 -
Psa6g1010 406 PANTHER PROTEIN ESMERALDA 1 1 391 - -
Psa6g1010 406 PIRSF UCP009360 26 393 IPR024709 -
Psa6g1010 406 PANTHER - 1 391 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g1010 Psa-Chr6 39206885 39213018 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g1010 110 390 Miscellaneous Gene Families AT5G01100 38.356 1.73e-52 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g1010 - - gmx:100788348 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g1010 6 39206885 39213018 Psa6g1010 6 39206885 39213018 ECH