Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0966 ATGAATGCTATAGCTACTGCTTCTGCTCTTTCTCTTCCCATCCTTTGTAGAACTTCTAAGCTTGACTCCAAAAGGGGTTTGAAAGGTAAATTTGGAGTGTTTGCTGTGTTCGGAGAAGCAGACAAAAAAAGTACATGGGGTGCAATCTTTGATGTAGAGGATCCAAGATCTAAAGTACCACAAAGTAAAGGGAAAATTTTGGATGTATATCAAGCGTTAGAAGTGGCTAGGCAGGATATTCACTACTGCGATTGGCGAGCTCGGCAAGACGTGCTTACCATCATGCTCCTCCACGAAAAGGTGGTTGAAGTTCTTAACCCTCTAGCACGTGAATTCAAATCGATTGACACCATGAAAAAGGATCTAGCTGGATTGCAGGACGAATTAGCAGATGCACACAGACAGGTTCATATCTCCGAAGCAAGGGTTTCCACTGCTTTAGATAAACTAGCTTACATGGAAGAATTGGTAAGTGATAGGCTATTGCAAGTGCAAGTGCAAGACCGAAGCACGGATGAAGTTGCCGAGACATCCTCTTCTCCGAGTACTTCTGCACAATCTGTACATACGGAAAGAAGAAGGAAGCCGAAGAAAAGCTTGAATGTTTCAGGTCCAGTTCAGTCATATCATCCTAATTTAAAGAATTTCTGGTATCCTGTTGCATTCTCTAATGACTTAAAGGATGATACTATGGTTCCAATGGAATGCTTTGAGGAACCATGGGTTATCTTTAGGGGCAAAGATGGCAAACCTGGATGTGTCCAGAATACATGTGCGCACAGAGCATGTCCCTTGCACCTCGGTTCAGTAAACGAGGGTCGTATCCAATGCCCTTATCATGGCTGGGAATATACAACTGACGGAAAATGCGAGAAAATGCCATCAACTAAAATGCTAAATGTTAAGATAAAGTCGATTCCATGCTTTGAGAAAGAAGGGATGATCTGGATTTGGCCCGGCAATGATCCCCCAATGGTCTCACTTCCGTCTTTACTACCTCCTTCTGGATTCGTCATCCATGCCGAGATTGTCATGGAACTTCCGGTTGAACATGGTTTACTTTTGGACAACCTTTTGGATCTTGCGCACGCCCCTTTTACTCATACTTCAACATTTGCAAAGGGATGGAGTGTTCCAAGCTTTGTGAATTTTTTGACACCTGCATCTGGCCTGCAAGGATATTGGGATCCCTATCCCATCGATATGGAGTTTCGACCGCCTTGTATGGTTCTATCAACCATTGGAATTTCAAAGCCCGGTAAACTGGAAGGACAAAGCACCAAAGAATGTGCAACACACCTTCACCAACTTCATGTCTGCTTACCTTCTTCAAAAAATAAAACAAGATTACTATATAGAATGTCGCTCGATTTCGCTCCACTCCTTAAGCATGTACCCTTTATGGAACATCTATGGAGGCATTTCGCAGAACAGGTGTTAAATGAGGATTTACGGCTCGTATTGGGGCAACAAGATAGAATGAACAATGGTGCAAATGTATGGAATGTGCCAGTTACCTATGACAAACTTGGAGTAAGGTACAGGCTTTGGAGGGATGCATTGGAAAAAGGAGATAAGCAACTACCTTTCAGCACATATAATAATTAA 1608 0.4279 MNAIATASALSLPILCRTSKLDSKRGLKGKFGVFAVFGEADKKSTWGAIFDVEDPRSKVPQSKGKILDVYQALEVARQDIHYCDWRARQDVLTIMLLHEKVVEVLNPLAREFKSIDTMKKDLAGLQDELADAHRQVHISEARVSTALDKLAYMEELVSDRLLQVQVQDRSTDEVAETSSSPSTSAQSVHTERRRKPKKSLNVSGPVQSYHPNLKNFWYPVAFSNDLKDDTMVPMECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTKMLNVKIKSIPCFEKEGMIWIWPGNDPPMVSLPSLLPPSGFVIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVNFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTKECATHLHQLHVCLPSSKNKTRLLYRMSLDFAPLLKHVPFMEHLWRHFAEQVLNEDLRLVLGQQDRMNNGANVWNVPVTYDKLGVRYRLWRDALEKGDKQLPFSTYNN* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0966 535 Pfam Pheophorbide a oxygenase 404 499 IPR013626 GO:0010277
Psa6g0966 535 Pfam Vanillate O-demethylase oxygenase C-terminal domain 350 374 IPR044043 GO:0016491
Psa6g0966 535 MobiDBLite consensus disorder prediction 171 204 - -
Psa6g0966 535 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 69 531 - -
Psa6g0966 535 MobiDBLite consensus disorder prediction 171 187 - -
Psa6g0966 535 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 69 531 - -
Psa6g0966 535 SUPERFAMILY Bet v1-like 313 522 - -
Psa6g0966 535 Pfam Rieske [2Fe-2S] domain 217 299 IPR017941 GO:0051537
Psa6g0966 535 CDD Rieske_RO_Alpha_Cao 200 324 - -
Psa6g0966 535 Coils Coil 115 142 - -
Psa6g0966 535 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 217 317 IPR017941 GO:0051537
Psa6g0966 535 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 258 280 IPR015881 GO:0005506|GO:0051537
Psa6g0966 535 SUPERFAMILY ISP domain 212 322 IPR036922 GO:0051537
Psa6g0966 535 Gene3D - 211 332 IPR036922 GO:0051537
Psa6g0966 535 Gene3D - 340 528 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0966 K13600 - gmx:100820586 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0966 6 36991222 36995761 Psa6g0966 6 36991222 36995761 ECH